RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 INTS11Q5TA45 600 aaKnown RBP16.87■□□□□ 0.29
PABPC1-215ENST00000520804 HIST3H2AQ7L7L0 130 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 SLC26A7Q8TE54 656 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 HIST1H2ACQ93077 130 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 PRSS27Q9BQR3 290 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 TMEFF2Q9UIK5 374 aaPredicted RBP16.87■□□□□ 0.29
PABPC1-215ENST00000520804 FZR1Q9UM11 496 aa16.87■□□□□ 0.29
PABPC1-215ENST00000520804 HMGB1P1B2RPK0 211 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-215ENST00000520804 FARS2O95363 451 aaKnown RBP16.86■□□□□ 0.29
PABPC1-215ENST00000520804 CCNIQ14094 377 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 VMACQ2NL98 169 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 REP15Q6BDI9 236 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 CCDC80Q76M96 950 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 RASSF5Q8WWW0 418 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 RDH5Q92781 318 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 SH3GL3Q99963 347 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 NPHS2Q9NP85 383 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 MEPEQ9NQ76 525 aaPredicted RBP16.86■□□□□ 0.29
PABPC1-215ENST00000520804 DUSP13Q9UII6 198 aa16.86■□□□□ 0.29
PABPC1-215ENST00000520804 BCL10O95999 233 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 QDPRP09417 244 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 UMPSP11172 480 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 ACHEP22303 614 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 COL8A2P25067 703 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 DVL1P1P54792 670 aaPredicted RBP16.85■□□□□ 0.29
PABPC1-215ENST00000520804 HIST3H3Q16695 136 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 LIPNQ5VXI9 398 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 METTL21CQ5VZV1 264 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 NANOGNBQ7Z5D8 188 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 DPPA2Q7Z7J5 298 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 SLC30A7Q8NEW0 376 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 OR4K5Q8NGD3 323 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 SIKE1Q9BRV8 207 aa16.85■□□□□ 0.29
PABPC1-215ENST00000520804 A0A1W2PPW3 197 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 SLC22A23A1A5C7 686 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 BLOC1S5-TXNDC5H3BN57 136 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 EDF1O60869 148 aaKnown RBP16.84■□□□□ 0.29
PABPC1-215ENST00000520804 IGHG1P01857 330 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 VIMP08670 466 aaKnown RBP16.84■□□□□ 0.29
PABPC1-215ENST00000520804 NAT2P11245 290 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 GPR6P46095 362 aaPredicted RBP16.84■□□□□ 0.29
PABPC1-215ENST00000520804 NRN1LQ496H8 165 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 RGS7BPQ6MZT1 257 aaPredicted RBP16.84■□□□□ 0.29
PABPC1-215ENST00000520804 TMEM53Q6P2H8 277 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 CARM1Q86X55 608 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 PAQR4Q8N4S7 273 aaPredicted RBP16.84■□□□□ 0.29
PABPC1-215ENST00000520804 RFLNBQ8N5W9 214 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 MCHR2Q969V1 340 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 RACGAP1Q9H0H5 632 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 C1orf198Q9H425 327 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 RNF121Q9H920 327 aa16.84■□□□□ 0.29
PABPC1-215ENST00000520804 ZNF346Q9UL40 294 aaKnown RBP16.84■□□□□ 0.29
PABPC1-215ENST00000520804 A0A0G2JND7 137 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 B4DSR2 109 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 FBP2O00757 339 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 MT-ND1P03886 318 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 FAM157BP0CG42 384 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 SRP14P37108 136 aaKnown RBP16.83■□□□□ 0.28
PABPC1-215ENST00000520804 TMEM33P57088 247 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 CLRN1P58418 232 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 MRPS11P82912 194 aaKnown RBP16.83■□□□□ 0.28
PABPC1-215ENST00000520804 RUNX1T1Q06455 604 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 RPL18Q07020 188 aaKnown RBP16.83■□□□□ 0.28
PABPC1-215ENST00000520804 CYLC2Q14093 348 aaPredicted RBP16.83■□□□□ 0.28
PABPC1-215ENST00000520804 SLC36A2Q495M3 483 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 NANOGP8Q6NSW7 305 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 SLC16A14Q7RTX9 510 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 CLDND2Q8NHS1 167 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 YIPF5Q969M3 257 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 ZNF347Q96SE7 839 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 SEPHS2Q99611 448 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 MRPL13Q9BYD1 178 aaKnown RBP16.83■□□□□ 0.28
PABPC1-215ENST00000520804 NANOGQ9H9S0 305 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 CDH20Q9HBT6 801 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 SH3GLB1Q9Y371 365 aa16.83■□□□□ 0.28
PABPC1-215ENST00000520804 A0A1W2PRG6 482 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 CENPBD1B2RD01 187 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 NCR1O76036 304 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 SNAP29O95721 258 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 PTHP01270 115 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 F13BP05160 661 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 SAGP10523 405 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-215ENST00000520804 CCL2P13500 99 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 FUT1P19526 365 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 PCMT1P22061 227 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 RBM34P42696 430 aaKnown RBP16.82■□□□□ 0.28
PABPC1-215ENST00000520804 ZNF84P51523 738 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 UGT2B15P54855 530 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 NKPD1Q17RQ9 610 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 RABL3Q5HYI8 236 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 CALHM3Q86XJ0 350 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 NKAIN4Q8IVV8 208 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 NOXO1Q8NFA2 376 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 PFN4Q8NHR9 129 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 ASB10Q8WXI3 467 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 SH3GL1Q99961 368 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 ZNF275Q9NSD4 429 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-215ENST00000520804 TAAR3PQ9P1P4 343 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 GPR160Q9UJ42 338 aa16.82■□□□□ 0.28
PABPC1-215ENST00000520804 BAG5Q9UL15 447 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms