RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 HSD17B8Q92506 261 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 TMEM41AQ96HV5 264 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 FAM71F1Q96KD3 344 aaPredicted RBP9.21□□□□□ -0.94
MCF2-209ENST00000520602 CDX2Q99626 313 aaPredicted RBP9.21□□□□□ -0.94
MCF2-209ENST00000520602 RBM24Q9BX46 236 aaKnown RBP9.21□□□□□ -0.94
MCF2-209ENST00000520602 SLCO1C1Q9NYB5 712 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 SF3B6Q9Y3B4 125 aaKnown RBP9.21□□□□□ -0.94
MCF2-209ENST00000520602 HTR3EA5X5Y0 456 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 PTHLHP12272 177 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 ANXA3P12429 323 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 DMWDQ09019 674 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 CHAF1BQ13112 559 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 DOC2BQ14184 412 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 CPEB2Q7Z5Q1 589 aaKnown RBP9.21□□□□□ -0.94
MCF2-209ENST00000520602 RABEPKQ7Z6M1 372 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 C15orf40Q8WUR7 153 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 ZMAT3Q9HA38 289 aaKnown RBP9.21□□□□□ -0.94
MCF2-209ENST00000520602 IFT46Q9NQC8 304 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 HHLA2Q9UM44 414 aa9.21□□□□□ -0.94
MCF2-209ENST00000520602 NSG1A0A0A6YYJ2 146 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 PRSS37A4D1T9 235 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 A6NL46 340 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 TMEM212A6NML5 194 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ARPC1BO15143 372 aaKnown RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 SYT7O43581 403 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ECDO95905 644 aaPredicted RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 TSPAN5P62079 268 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ARFRP1Q13795 201 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ETFDHQ16134 617 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CCDC58Q4VC31 144 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 BAIAP2L2Q6UXY1 529 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 H1FNTQ75WM6 255 aaPredicted RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 DCXRQ7Z4W1 244 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 KMT5CQ86Y97 462 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 THRSPQ92748 146 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 TSPAN32Q96QS1 320 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CCNL2Q96S94 520 aaPredicted RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 OR51J1Q9H342 316 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 APMAPQ9HDC9 416 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 LANCL2Q9NS86 450 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ICAM5Q9UMF0 924 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ALG1L2C9J202 215 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 SYPP08247 313 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ITGA5P08648 1049 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CD53P19397 219 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CSF2RBP32927 897 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ZNF81P51508 661 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 AP2S1P53680 142 aaPredicted RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 TMEM164Q5U3C3 297 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 MRGPREQ86SM8 312 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CMTM4Q8IZR5 234 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 OR4D9Q8NGE8 314 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 OR2G2Q8NGZ5 317 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 NPRL2Q8WTW4 380 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 LRFN5Q96NI6 719 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 SMOC1Q9H4F8 434 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CYSLTR2Q9NS75 346 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 B9D1Q9UPM9 204 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 GVINP1Q7Z2Y8 2422 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 TCRBV16S1A1N1A0A5B0 115 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 SHISA3A0PJX4 238 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 IFITM5A6NNB3 132 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 F5H5K5 113 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 TCRBP04435 133 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 SLC2A1P11166 492 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ERP29P30040 261 aaKnown RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 PTH2RP49190 550 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 PSMA6P60900 246 aaKnown RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 UBE2NLQ5JXB2 153 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 YOD1Q5VVQ6 348 aaPredicted RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 DMKNQ6E0U4 476 aaPredicted RBP9.2□□□□□ -0.94
MCF2-209ENST00000520602 MISPQ8IVT2 679 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 OR8H3Q8N146 312 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ZNF721Q8TF20 911 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 UCK1Q9HA47 277 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 ALKBH4Q9NXW9 302 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 PISDQ9UG56 409 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 CAMK2AQ9UQM7 478 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 HIF3AQ9Y2N7 669 aa9.2□□□□□ -0.94
MCF2-209ENST00000520602 DDAH2O95865 285 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 IGLV3-19P01714 112 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 DNASE1P24855 282 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 PRSS3P35030 304 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 FOLR3P41439 243 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 FOXF1Q12946 379 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 FCN2Q15485 313 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 COL13A1Q5TAT6 717 aaPredicted RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 C19orf48Q6RUI8 117 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 GALNTL5Q7Z4T8 443 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 ASB17Q8WXJ9 295 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 ABHD1Q96SE0 405 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 AUNIPQ9H7T9 357 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 PATE3B3GLJ2 98 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 P2RY10O00398 339 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 EPHA8P29322 1005 aaPredicted RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 RFX2P48378 723 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 FMODQ06828 376 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 EMC4Q5J8M3 183 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 ARSKQ6UWY0 536 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms