RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SYNRGQ9UMZ2 1314 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 LRRK1Q38SD2 2015 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 TRAV39A0A0B4J263 110 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 USP27XA6NNY8 438 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SUPT3HB4E1H0 165 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 GOLGA8TH3BQL2 631 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 NPIPB7O75200 414 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 FGFR1OPO95684 399 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 CLIC3O95833 236 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 AK4P27144 223 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 DCKP27707 260 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 CCR8P51685 355 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 HERPUD1Q15011 391 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SF3A2Q15428 464 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 LRRC10Q5BKY1 277 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 PPM1LQ5SGD2 360 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 TTC23LQ6PF05 361 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 C6orf89Q6UWU4 347 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 H2AFVQ71UI9 128 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 MMAAQ8IVH4 418 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 TMEM61Q8N0U2 210 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SLC7A13Q8TCU3 470 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SDR42E1Q8WUS8 393 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 ISG20Q96AZ6 181 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SGK3Q96BR1 496 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 XPO6Q96QU8 1125 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 RASL11BQ9BPW5 248 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 EML4Q9HC35 981 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 RPRD1BQ9NQG5 326 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SAMSN1Q9NSI8 373 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 MRPL22Q9NWU5 206 aaKnown RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 MTCH1Q9NZJ7 389 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 PDP1Q9P0J1 537 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 GOLT1BQ9Y3E0 138 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
HMGB1P46-201ENST00000520062 PHLPP2Q6ZVD8 1323 aa3.71□□□□□ -1.81
HMGB1P46-201ENST00000520062 KCNE1BA0A087WTH5 132 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 IGKV1D-13A0A0B4J2D9 117 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 GLYATL1P3A0A0U1RQE8 302 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 A0A1B0GVI7 797 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 IGLV1-47P01700 117 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 CSF3P09919 207 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 IGKV1-13P0DP09 117 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 FUT3P21217 361 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 GSTM3P21266 225 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 SERPINB5P36952 375 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 RPS5P46782 204 aaKnown RBP3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 RORCP51449 518 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 SH3BGRP55822 239 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 CLDN8P56748 225 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 ECH1Q13011 328 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 FZD2Q14332 565 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 KLHL40Q2TBA0 621 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 BEX5Q5H9J7 111 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 PIP5KL1Q5T9C9 394 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 HSD17B11Q8NBQ5 300 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR4F15Q8NGB8 312 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR10R2Q8NGX6 335 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 MARCH1Q8TCQ1 289 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 UGT1A10Q9HAW8 530 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 NTN4Q9HB63 628 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 MMP26Q9NRE1 261 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 HRASLS2Q9NWW9 162 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 PEF1Q9UBV8 284 aaKnown RBP3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 LGALS13Q9UHV8 139 aa3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 CHTOPQ9Y3Y2 248 aaKnown RBP3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 PHF3Q92576 2039 aaKnown RBP3.71□□□□□ -1.82
HMGB1P46-201ENST00000520062 GJE1A6NN92 205 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 H3BNH8 94 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 PEX7O00628 323 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 EIF4E2O60573 245 aaKnown RBP3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 IGHV3-43DP0DP04 118 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 CRISP2P16562 243 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 BCKDHBP21953 392 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 CAV2P51636 162 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACTA2P62736 377 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACTG2P63267 376 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACTC1P68032 377 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACTA1P68133 377 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 AQP6Q13520 282 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ITIH4Q14624 930 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 CLINT1Q14677 625 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 KRTAP27-1Q3LI81 207 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 COA6Q5JTJ3 125 aaKnown RBP3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 PAGE3Q5JUK9 113 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 COX15Q7KZN9 410 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 THOC6Q86W42 341 aaKnown RBP3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 NPBQ8NG41 125 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF502Q8TBZ5 544 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 MCOLN3Q8TDD5 553 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 TEKT3Q9BXF9 490 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 ANKRD60Q9BZ19 345 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 UGT1A7Q9HAW7 530 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 UGT1A8Q9HAW9 530 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 FANCEQ9HB96 536 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 LYRM4Q9HD34 91 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 PTTG3PQ9NZH4 202 aa3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 CCDC59Q9P031 241 aaKnown RBP3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 SLC17A4Q9Y2C5 497 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms