RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 HSD11B1LQ7Z5J1 315 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SCD5Q86SK9 330 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF677Q86XU0 584 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CBWD2Q8IUF1 395 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 FBXO16Q8IX29 292 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TBC1D19Q8N5T2 526 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 C19orf18Q8NEA5 215 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 FAM83FQ8NEG4 500 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF680Q8NEM1 530 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PROKR2Q8NFJ6 384 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 OR5AU1Q8NGC0 362 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 OR6Q1Q8NGQ2 317 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SPRYD4Q8WW59 207 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ARNTL2Q8WYA1 636 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RAD51AP1Q96B01 352 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 UPRTQ96BW1 309 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PHYHIPLQ96FC7 376 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF514Q96K75 400 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 DNAJC1Q96KC8 554 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF578Q96N58 590 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 RIT2Q99578 217 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CTRCQ99895 268 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 MAPKAP1Q9BPZ7 522 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 C7orf50Q9BRJ6 194 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 TSSK1BQ9BXA7 367 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 UPF3BQ9BZI7 483 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ILKAPQ9H0C8 392 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 MAGT1Q9H0U3 335 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SLC25A51Q9H1U9 297 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 LRRN3Q9H3W5 708 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ELOVL6Q9H5J4 265 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ASB8Q9H765 288 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 MRPL47Q9HD33 250 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CCNB1IP1Q9NPC3 277 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PXMP2Q9NR77 195 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ABCB10Q9NRK6 738 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 EURLQ9NYK6 297 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ONECUT1Q9UBC0 465 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 WARS2Q9UGM6 360 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 NAGKQ9UJ70 344 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 ENPP5Q9UJA9 477 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 GGA2Q9UJY4 613 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PITPNC1Q9UKF7 332 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 IKZF2Q9UKS7 526 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 SAMD4AQ9UPU9 718 aaKnown RBP2.62□□□□□ -1.99
VPS13B-207ENST00000518569 PPIAL4AQ9Y536 164 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 CEP350Q5VT06 3117 aa2.62□□□□□ -1.99
VPS13B-207ENST00000518569 LRPPRCP42704 1394 aaKnown RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ANKRD30BQ9BXX2 1392 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 VWDEQ8N2E2 1590 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 LRP5O75197 1615 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ATP10AO60312 1499 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SHANK2Q9UPX8 1470 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 A0A1B0GTI1 187 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 METTL21EPA6NDL7 271 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 OR2AG2A6NM03 316 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 LRRC30A6NM36 301 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SNTNA6NMZ2 147 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 E9PLD3 99 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 DYNC1I1O14576 645 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 OR7A17O14581 309 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 GPR171O14626 319 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 KDELR3O43731 214 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 TIMM8AO60220 97 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 OR10H3O60404 316 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SCN2BO60939 215 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SMIM24O75264 130 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 UPK3AO75631 287 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 TSPAN12O95859 305 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 IGHV3-23P01764 117 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 RPS17P08708 135 aaKnown RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 KRT16P08779 473 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 PNMA6AP0CW24 399 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 CTRB1P17538 263 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ATF6P18850 670 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ZBTB25P24278 435 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 UGT1A3P35503 534 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 TUFMP49411 452 aaKnown RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 CDC34P49427 236 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SERPINB9P50453 376 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 OC90Q02509 493 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 PAX5Q02548 391 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 BST2Q10589 180 aaKnown RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF154Q13106 437 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF79Q15937 498 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 C18orf21Q32NC0 220 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-207ENST00000518569 XKR4Q5GH76 650 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 C6orf226Q5I0X4 101 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 CDKL4Q5MAI5 379 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 C6orf183Q5T699 404 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 MFSD14CQ5VZR4 134 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 CTRB2Q6GPI1 263 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 OR5M10Q6IEU7 315 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 H3F3CQ6NXT2 135 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SLC39A4Q6P5W5 647 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 KCNIP4Q6PIL6 250 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 SLC35D2Q76EJ3 337 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 MOB1BQ7L9L4 216 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ERASQ7Z444 233 aa2.61□□□□□ -1.99
VPS13B-207ENST00000518569 ABHD12BQ7Z5M8 362 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms