RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CBX1P83916 185 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 MYBPC1Q00872 1141 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 GK3PQ14409 553 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 ADAM5Q6NVV9 412 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 SMARCD3Q6STE5 483 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 TUBA1AQ71U36 451 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 ASRGL1Q7L266 308 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 FAM122BQ7Z309 247 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 ARIH2OSQ8N7S6 290 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 FANK1Q8TC84 345 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 FNDC8Q8TC99 324 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 NMD3Q96D46 503 aaKnown RBP19.2■□□□□ 0.66
VEGFA-217ENST00000518538 SMURF2Q9HAU4 748 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 NRIP3Q9NQ35 241 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 CRNNQ9UBG3 495 aaPredicted RBP19.2■□□□□ 0.66
VEGFA-217ENST00000518538 ADAM18Q9Y3Q7 739 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 ABCD4O14678 606 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 ENTPD5O75356 428 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 B4GALT1P15291 398 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 CD47Q08722 323 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 TSPAN31Q12999 210 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 C10orf128Q5T292 105 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF770Q6IQ21 691 aaPredicted RBP19.19■□□□□ 0.66
VEGFA-217ENST00000518538 THSD4Q6ZMP0 1018 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 FAM169BQ8N8A8 192 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 PAPD5Q8NDF8 572 aaKnown RBP19.19■□□□□ 0.66
VEGFA-217ENST00000518538 OR9Q2Q8NGE9 314 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 AKAP1Q92667 903 aaKnown RBP eCLIP19.19■□□□□ 0.66
VEGFA-217ENST00000518538 RADILQ96JH8 1075 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 YY1AP1Q9H869 796 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 CCM2LQ9NUG4 571 aaPredicted RBP19.19■□□□□ 0.66
VEGFA-217ENST00000518538 TMEM38BQ9NVV0 291 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 PLEKHA6Q9Y2H5 1048 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 U3KQV3 271 aa19.19■□□□□ 0.66
VEGFA-217ENST00000518538 HRNRQ86YZ3 2850 aaPredicted RBP19.19■□□□□ 0.66
VEGFA-217ENST00000518538 EBAG9O00559 213 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 HS3ST1O14792 307 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 ATE1O95260 518 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 DNASE1P24855 282 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 ERFP50548 548 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF84P51523 738 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 PPP1R8Q12972 351 aaKnown RBP19.18■□□□□ 0.66
VEGFA-217ENST00000518538 MICAQ29983 383 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 C3orf36Q3SXR2 165 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 NRN1LQ496H8 165 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 THEM4Q5T1C6 240 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 GPR139Q6DWJ6 353 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 DPY19L2P2Q6ZN68 376 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 C20orf204Q6ZNR8 217 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 KBTBD8Q8NFY9 601 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 LILRB1Q8NHL6 650 aaPredicted RBP19.18■□□□□ 0.66
VEGFA-217ENST00000518538 Q96M85 177 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF570Q96NI8 536 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 OR52D1Q9H346 318 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 IL20RAQ9UHF4 553 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 PDZD2O15018 2839 aa19.18■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF503-AS2A6NEH8 195 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 SHISA9B4DS77 424 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 XKRYO14609 159 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 FKBP6O75344 327 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 SLC2A10O95528 541 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 IGKV3-15P01624 115 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 IGLV1-44P01699 117 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 OR8G3PP0DMU2 310 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 CBR1P16152 277 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 SDHAP31040 664 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 CAPZA2P47755 286 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 FMODQ06828 376 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 KEAP1Q14145 624 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 RFX4Q33E94 735 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF672Q499Z4 452 aaPredicted RBP19.17■□□□□ 0.66
VEGFA-217ENST00000518538 MESTQ5EB52 335 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 C1orf146Q5VVC0 180 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
VEGFA-217ENST00000518538 SLC22A24Q8N4F4 322 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 NANOS1Q8WY41 292 aaKnown RBP19.17■□□□□ 0.66
VEGFA-217ENST00000518538 SLC38A2Q96QD8 506 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 RBP7Q96R05 134 aa19.17■□□□□ 0.66
VEGFA-217ENST00000518538 RAI1Q7Z5J4 1906 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-217ENST00000518538 IGHV1-18A0A0C4DH31 117 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 TEX13CA0A0J9YWL9 993 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 ARHGEF9O43307 516 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 AHCYL1O43865 530 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 GASTP01350 101 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 APEHP13798 732 aaKnown RBP19.16■□□□□ 0.66
VEGFA-217ENST00000518538 SLC6A6P31641 620 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 ARR3P36575 388 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 RPS6KA3P51812 740 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 IST1P53990 364 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 SPOCK1Q08629 439 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 KRR1Q13601 381 aaKnown RBP19.16■□□□□ 0.66
VEGFA-217ENST00000518538 SLC25A47Q6Q0C1 308 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF620Q6ZNG0 422 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 CLDN22Q8N7P3 220 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF611Q8N823 705 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 AQP11Q8NBQ7 271 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 SLCO4A1Q96BD0 722 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 B3GNT2Q9NY97 397 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 ZNF224Q9NZL3 707 aa19.16■□□□□ 0.66
VEGFA-217ENST00000518538 IER3IP1Q9Y5U9 82 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms