RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SEC16AO15027 2179 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ATRXP46100 2492 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MDC1Q14676 2089 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 A0A0G2JMM0 328 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PPB8 328 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PRS3 328 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR6C68A6NDL8 312 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CBY3A6NI87 242 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR6C65A6NJZ3 312 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DUXAA6NLW8 204 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 KIR3DP1A8MWS1 328 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SCO2O43819 266 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CDC14BO60729 498 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PRAF2O60831 178 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ICOSLGO75144 302 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 UGT2B11O75310 529 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SORBS2O94875 1100 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 KCNK2O95069 426 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 UTS2O95399 124 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 KRT75O95678 551 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 KRT16P08779 473 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CT45A8P0DMV1 189 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CT45A9P0DMV2 189 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ACP2P11117 423 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 UMPSP11172 480 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NAGAP17050 411 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 IGFBP2P18065 325 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 HNF1AP20823 631 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MATN1P21941 496 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GNLYP22749 145 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GCSHP23434 173 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 UCP1P25874 307 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 LCN1P31025 176 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CDKN2CP42773 168 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CRATP43155 626 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DNASE1L1P49184 302 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ANXA11P50995 505 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 ATP4BP51164 291 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PSMD4P55036 377 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 PSPHP78330 225 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PSG6Q00889 435 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ROR2Q01974 943 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 RASGEF1BQ0VAM2 473 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 STX5Q13190 355 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GK2Q14410 553 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 DUSP5Q16690 384 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ANKRD55Q3KP44 614 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PDLIM3Q53GG5 364 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 CT45A2Q5DJT8 189 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 RABL3Q5HYI8 236 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.47□□□□□ -2.01
SKP1-204ENST00000517691 CCNJQ5T5M9 372 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 C1QL3Q5VWW1 255 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 METTL21CQ5VZV1 264 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CARD17Q5XLA6 110 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR5M10Q6IEU7 315 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MFSD12Q6NUT3 480 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GFRALQ6UXV0 394 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NPSR1Q6W5P4 371 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 C16orf62Q7Z3J2 963 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLC22A16Q86VW1 577 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 RNF130Q86XS8 419 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MISPQ8IVT2 679 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 IZUMO1Q8IYV9 350 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FAM71CQ8NEG0 241 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR2M7Q8NG81 312 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR5D16Q8NGK9 328 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR1J4Q8NGS1 313 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PNPT1Q8TCS8 783 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SPPL2AQ8TCT8 520 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SFXN5Q8TD22 340 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 WIPF2Q8TF74 440 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 FAR1Q8WVX9 515 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CDS1Q92903 461 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MOAP1Q96BY2 351 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MSI2Q96DH6 328 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SPDL1Q96EA4 605 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SCMH1Q96GD3 660 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLC35G5Q96KT7 338 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CCDC115Q96NT0 180 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GNRHR2Q96P88 292 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ZNF317Q96PQ6 595 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 TAAR6Q96RI8 345 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NODALQ96S42 347 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ALKBH7Q9BT30 221 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 LMF2Q9BU23 707 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 OSBPL10Q9BXB5 764 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ACTRT3Q9BYD9 372 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TBL1XR1Q9BZK7 514 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PKIBQ9C010 78 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 VCX3BQ9H321 246 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR51I1Q9H343 314 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PIGMQ9H3S5 423 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TRIM45Q9H8W5 580 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SEC61A2Q9H9S3 476 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GALNT9Q9HCQ5 603 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DEPPQ9NTK1 212 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GIN1Q9NXP7 522 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 STX18Q9P2W9 335 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 B4GALT7Q9UBV7 327 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms