RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PPP1R7Q15435 360 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 KHDRBS2Q5VWX1 349 aaKnown RBP1.87□□□□□ -2.11
SKP1-203ENST00000517625 UQCC3Q6UW78 93 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 TMEM107Q6UX40 140 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 CDR2LQ86X02 465 aaPredicted RBP1.87□□□□□ -2.11
SKP1-203ENST00000517625 RHEBL1Q8TAI7 183 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 TMEM158Q8WZ71 300 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 STARD8Q92502 1023 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 TMEM54Q969K7 222 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 PIK3IP1Q96FE7 263 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 PLIN2Q99541 437 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 P2RX4Q99571 388 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 GON7Q9BXV9 100 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 GABARAPL3Q9BY60 117 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 MRPL37Q9BZE1 423 aaKnown RBP1.87□□□□□ -2.11
SKP1-203ENST00000517625 RPP21Q9H633 154 aaKnown RBP1.87□□□□□ -2.11
SKP1-203ENST00000517625 UGT1A7Q9HAW7 530 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 UGT1A10Q9HAW8 530 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 UGT1A8Q9HAW9 530 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 ZFP14Q9HCL3 533 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 KLHL28Q9NXS3 571 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 ZNF223Q9UK11 482 aaPredicted RBP1.87□□□□□ -2.11
SKP1-203ENST00000517625 GTF3C1Q12789 2109 aa1.87□□□□□ -2.11
SKP1-203ENST00000517625 MSH6P52701 1360 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 IGKV2-28A0A075B6P5 120 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 IGKV1D-13A0A0B4J2D9 117 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 KIR2DL5BA0A0G2JN68 375 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 KIR2DL5BA0A0G2JPC4 375 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 FOXE1O00358 373 aaPredicted RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 MPHOSPH10O00566 681 aaKnown RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 ANGPTL7O43827 346 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 SERPINA3P01011 423 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 IGKV2D-28P01615 120 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 SERPIND1P05546 499 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 IGKV1-13P0DP09 117 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 TROVE2P10155 538 aaKnown RBP eCLIP1.86□□□□□ -2.11
SKP1-203ENST00000517625 IGFBP3P17936 291 aaPredicted RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 TNNI1P19237 187 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 TPMTP51580 245 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 ZNF136P52737 540 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 GPX6P59796 221 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 RPS21P63220 83 aaKnown RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 ACTA1P68133 377 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 SLC7A9P82251 487 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 BST1Q10588 318 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 TCP10Q12799 353 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 CLINT1Q14677 625 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 TGFBIQ15582 683 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 FAM71E1Q6IPT2 247 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 IGFL3Q6UXB1 125 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 STRADAQ7RTN6 431 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 TAS2R42Q7RTR8 314 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 THOC6Q86W42 341 aaKnown RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 KIR2DL5AQ8N109 375 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 PDIK1LQ8N165 341 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 Q8N976 141 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 OR2L3Q8NG85 312 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 OR4S2Q8NH73 311 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 KIR2DL5BQ8NHK3 375 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 FAM110BQ8TC76 370 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 FBXO32Q969P5 355 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 LRRC58Q96CX6 371 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 DNAJC19Q96DA6 116 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 SEH1LQ96EE3 360 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 CEP170P1Q96L14 293 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 RARRES2Q99969 163 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 LZTS2Q9BRK4 669 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 PATZ1Q9HBE1 687 aaKnown RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 ISYNA1Q9NPH2 558 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 PSMC3IPQ9P2W1 217 aaPredicted RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 SLC7A8Q9UHI5 535 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 STARD10Q9Y365 291 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 F11RQ9Y624 299 aaKnown RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 PHF3Q92576 2039 aaKnown RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 NFASCO94856 1347 aa1.86□□□□□ -2.11
SKP1-203ENST00000517625 CENPJQ9HC77 1338 aaPredicted RBP1.86□□□□□ -2.11
SKP1-203ENST00000517625 CDC7O00311 574 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 BET1O15155 118 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 MRPS12O15235 138 aaKnown RBP1.85□□□□□ -2.11
SKP1-203ENST00000517625 ZNF324O75467 553 aaPredicted RBP1.85□□□□□ -2.11
SKP1-203ENST00000517625 EEDO75530 441 aaKnown RBP1.85□□□□□ -2.11
SKP1-203ENST00000517625 WBP4O75554 376 aaKnown RBP1.85□□□□□ -2.11
SKP1-203ENST00000517625 RAB3DO95716 219 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CST1P01037 141 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CISD3P0C7P0 127 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CALM1P0DP23 149 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CALM2P0DP24 149 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CALM3P0DP25 149 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 ZNF43P17038 809 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CNR1P21554 472 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CYB561P49447 251 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 DEFB116Q30KQ4 102 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 VPS26BQ4G0F5 336 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 THEM4Q5T1C6 240 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 ZNF691Q5VV52 312 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CERS6Q6ZMG9 384 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 ZFP2Q6ZN57 461 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 HDDC2Q7Z4H3 204 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 OR56B2PQ8NGI1 322 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 OR10R2Q8NGX6 335 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms