RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IKZF5Q9H5V7 419 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 C3orf14Q9HBI5 128 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZFP64Q9NPA5 681 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 C8orf4Q9NR00 106 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 DUSP22Q9NRW4 184 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PNO1Q9NRX1 252 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 AIG1Q9NVV5 245 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PAK1IP1Q9NWT1 392 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GID8Q9NWU2 228 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 THUMPD1Q9NXG2 353 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZIM2Q9NZV7 527 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CNIH4Q9P003 139 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SEC14L4Q9UDX3 406 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 BTNL2Q9UIR0 455 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 OAZ3Q9UMX2 235 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PROCRQ9UNN8 238 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 EXO1Q9UQ84 846 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GPR52Q9Y2T5 361 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GPR55Q9Y2T6 319 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SIGLEC9Q9Y336 463 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SNX13Q9Y5W8 968 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SNX8Q9Y5X2 465 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GPR45Q9Y5Y3 372 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NUP214P35658 2090 aaPredicted RBP2.65□□□□□ -1.98
SCARNA13-201ENST00000516672 HEATR5BQ9P2D3 2071 aa2.65□□□□□ -1.98
SCARNA13-201ENST00000516672 TRBV11-1A0A0K0K1C0 115 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 LOC105371267A0A1B0GV96 52 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 A0A1W2PRB8 838 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR6C70A6NIJ9 312 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GLOD5A6NK44 160 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 BBIP1A8MTZ0 92 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CLDN25C9JDP6 229 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 FAM229AH3BQW9 127 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TP53I11O14683 189 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC22A1O15245 554 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PDPK1O15530 556 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SCO2O43819 266 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SCN2BO60939 215 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 UGT2B11O75310 529 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 BCAS1O75363 584 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SH3BGRLO75368 114 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 FBXO24O75426 580 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PPM1BO75688 479 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR2J2O76002 312 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CBX7O95931 251 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 AK1P00568 194 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 HPRP00739 348 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OXTP01178 125 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CLPSP04118 112 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ALPLP05186 524 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GPIP06744 558 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ABCB1P08183 1280 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CCL3P10147 92 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PF4V1P10720 104 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ACP2P11117 423 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 LAMP1P11279 417 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 IL7RP16871 459 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PSMB1P20618 241 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NT5EP21589 574 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC6A2P23975 617 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CRHBPP24387 322 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ELK4P28324 431 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TGFBR2P37173 567 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PIGAP37287 484 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 FEN1P39748 380 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CASP3P42574 277 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MASP1P48740 699 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ALDH9A1P49189 494 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GSK3BP49841 420 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ANXA11P50995 505 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NCBP2P52298 156 aaKnown RBP eCLIP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PNLIPRP2P54317 469 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RAD23AP54725 363 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 STX1BP61266 288 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ESRRGP62508 458 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RPL38P63173 70 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RASGEF1BQ0VAM2 473 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 BNIP2Q12982 314 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 STX5Q13190 355 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TP53BP2Q13625 1128 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DAG1Q14118 895 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 EFR3AQ14156 821 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GNA13Q14344 377 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PTGR1Q14914 329 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MAPRE2Q15555 327 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NTRK2Q16620 822 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NDUFA5Q16718 116 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TRIM16LQ309B1 348 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SPATS1Q496A3 300 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TIGD2Q4W5G0 525 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 AGKQ53H12 422 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TRMT12Q53H54 448 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SMUG1Q53HV7 270 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ARSJQ5FYB0 599 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 COQ5Q5HYK3 327 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 EXOSC6Q5RKV6 272 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 C6orf183Q5T699 404 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ATAD3BQ5T9A4 648 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 HLA-DQA1Q5Y7H0 255 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms