RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	ADORA3	P0DMS8	318 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	ERVS71-1	P61550	626 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	MOG	Q16653	247 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	KRT71	Q3SY84	523 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	TMEM53	Q6P2H8	277 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	DHRS4L2	Q6PKH6	230 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	WDR88	Q6ZMY6	472 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	DPPA2	Q7Z7J5	298 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	OR5J2	Q8NH18	312 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	OR6X1	Q8NH79	312 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	TMEM54	Q969K7	222 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	SH3GL3	Q99963	347 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	SPATA5L1	Q9BVQ7	753 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	BCL2L14	Q9BZR8	327 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	RNF121	Q9H920	327 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	SAP30L	Q9HAJ7	183 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	TCF7L2	Q9NQB0	619 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	TMEM38B	Q9NVV0	291 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	GLTP	Q9NZD2	209 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	OPN4	Q9UHM6	478 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	CACNG2	Q9Y698	323 aa		13.4	□□□□□ -0.26
LMNA-223	ENST00000515459	C11orf98	E9PRG8	122 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	TPST1	O60507	370 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	OR6A2	O95222	327 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	MT-ATP6	P00846	226 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	PTH	P01270	115 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	DRD4	P21917	467 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	POLR2J	P52435	117 aa	Known RBP	13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	UCP2	P55851	309 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	RGS8	P57771	180 aa	Predicted RBP	13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	VSNL1	P62760	191 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	DEFA6	Q01524	100 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	MPP2	Q14168	576 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	OR1Q1	Q15612	314 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	TST	Q16762	297 aa	Known RBP	13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	TBC1D28	Q2M2D7	210 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	SLC36A2	Q495M3	483 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	KRT73	Q86Y46	540 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	ICA1L	Q8NDH6	482 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	OR1J2	Q8NGS2	313 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	NFKBID	Q8NI38	313 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	GTF2H4	Q92759	462 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	DVL3	Q92997	716 aa	Predicted RBP	13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	ELMOD3	Q96FG2	381 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	GAL3ST1	Q99999	423 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	TMEM43	Q9BTV4	400 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	PAIP1	Q9H074	479 aa	Known RBP	13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	LRMDA	Q9H2I8	198 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	ARHGAP32	A7KAX9	2087 aa		13.39	□□□□□ -0.27
LMNA-223	ENST00000515459	ZNF500	O60304	480 aa	Predicted RBP	13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	ARAF	P10398	606 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	KIT	P10721	976 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	PRTN3	P24158	256 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	CDH12	P55289	794 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	LCN2	P80188	198 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	GLO1	Q04760	184 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	PLP2	Q04941	152 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	FAM209A	Q5JX71	171 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	SWT1	Q5T5J6	900 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	REEP3	Q6NUK4	255 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	LRFN4	Q6PJG9	635 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	TREML4	Q6UXN2	200 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	SLC35D2	Q76EJ3	337 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	SIGLECL1	Q8N7X8	197 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	OR4K5	Q8NGD3	323 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	OR9I1	Q8NGQ6	314 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	AEN	Q8WTP8	325 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	CCL17	Q92583	94 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	GTF3A	Q92664	365 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	ZNF566	Q969W8	418 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	MAEL	Q96JY0	434 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	PAIP2	Q9BPZ3	127 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	KCNK9	Q9NPC2	374 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	SLC13A4	Q9UKG4	626 aa		13.38	□□□□□ -0.27
LMNA-223	ENST00000515459	IQCM	A0A1B0GVH7	501 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	ISPD	A4D126	451 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	DHH	O43323	396 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	IGHV3-13	P01766	116 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	ZNF81	P51508	661 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	SLC2A7	Q6PXP3	512 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	SLC16A14	Q7RTX9	510 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	GOLGA6L1	Q8N7Z2	621 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	OR1J1	Q8NGS3	322 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	ST7L	Q8TDW4	575 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	LRRC58	Q96CX6	371 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	SLC25A44	Q96H78	314 aa	Predicted RBP	13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	ZMAT3	Q9HA38	289 aa	Known RBP	13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	THAP1	Q9NVV9	213 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	UBAP1	Q9NZ09	502 aa		13.37	□□□□□ -0.27
LMNA-223	ENST00000515459	TANC2	Q9HCD6	1990 aa		13.36	□□□□□ -0.27
LMNA-223	ENST00000515459	PPIAL4E	A0A075B759	164 aa		13.36	□□□□□ -0.27
LMNA-223	ENST00000515459	PPIAL4C	A0A0B4J2A2	164 aa		13.36	□□□□□ -0.27
LMNA-223	ENST00000515459	PRORSD1P	A6NEY8	169 aa		13.36	□□□□□ -0.27
LMNA-223	ENST00000515459	PPIAL4D	F5H284	164 aa		13.36	□□□□□ -0.27
LMNA-223	ENST00000515459	UBD	O15205	165 aa		13.36	□□□□□ -0.27
LMNA-223	ENST00000515459	TPST2	O60704	377 aa		13.36	□□□□□ -0.27

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