RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 FXYD6P3P58550 94 aa8.8□□□□□ -1
VCAN-210ENST00000513960 EXOSC7Q15024 291 aaKnown RBP8.8□□□□□ -1
VCAN-210ENST00000513960 LEG1Q6P5S2 330 aa8.8□□□□□ -1
VCAN-210ENST00000513960 FAM199XQ6PEV8 388 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 OR14A16Q8NHC5 309 aa8.8□□□□□ -1
VCAN-210ENST00000513960 HAVCR2Q8TDQ0 301 aa8.8□□□□□ -1
VCAN-210ENST00000513960 OR1E3Q8WZA6 343 aa8.8□□□□□ -1
VCAN-210ENST00000513960 DCUN1D4Q92564 292 aa8.8□□□□□ -1
VCAN-210ENST00000513960 APMAPQ9HDC9 416 aa8.8□□□□□ -1
VCAN-210ENST00000513960 M0R036 132 aa8.8□□□□□ -1
VCAN-210ENST00000513960 BHLHE40O14503 412 aa8.8□□□□□ -1
VCAN-210ENST00000513960 LDB3O75112 727 aa8.8□□□□□ -1
VCAN-210ENST00000513960 CCKBRP32239 447 aa8.8□□□□□ -1
VCAN-210ENST00000513960 KIR2DL1P43626 348 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 PPP2CBP62714 309 aa8.8□□□□□ -1
VCAN-210ENST00000513960 PPP2CAP67775 309 aa8.8□□□□□ -1
VCAN-210ENST00000513960 PLA2G7Q13093 441 aa8.8□□□□□ -1
VCAN-210ENST00000513960 FZD5Q13467 585 aa8.8□□□□□ -1
VCAN-210ENST00000513960 TMEM196Q5HYL7 178 aa8.8□□□□□ -1
VCAN-210ENST00000513960 STEAP1BQ6NZ63 245 aa8.8□□□□□ -1
VCAN-210ENST00000513960 MCATQ8IVS2 390 aaKnown RBP8.8□□□□□ -1
VCAN-210ENST00000513960 OR1J2Q8NGS2 313 aa8.8□□□□□ -1
VCAN-210ENST00000513960 SFT2D1Q8WV19 159 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ARL11Q969Q4 196 aa8.8□□□□□ -1
VCAN-210ENST00000513960 TMEM106AQ96A25 262 aa8.8□□□□□ -1
VCAN-210ENST00000513960 WDR92Q96MX6 357 aa8.8□□□□□ -1
VCAN-210ENST00000513960 SERINC2Q96SA4 455 aa8.8□□□□□ -1
VCAN-210ENST00000513960 RPP25Q9BUL9 199 aaKnown RBP8.8□□□□□ -1
VCAN-210ENST00000513960 TINAGL1Q9GZM7 467 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 COMMD4Q9H0A8 199 aa8.8□□□□□ -1
VCAN-210ENST00000513960 CTSFQ9UBX1 484 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ST6GALNAC2Q9UJ37 374 aa8.8□□□□□ -1
VCAN-210ENST00000513960 RPH3AQ9Y2J0 694 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 A0A1B0GV50 99 aa8.8□□□□□ -1
VCAN-210ENST00000513960 HMSDA8MTL9 139 aa8.8□□□□□ -1
VCAN-210ENST00000513960 K7EQS6 105 aa8.8□□□□□ -1
VCAN-210ENST00000513960 SULT1C2O00338 296 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ZFPL1O95159 310 aa8.8□□□□□ -1
VCAN-210ENST00000513960 EML2O95834 649 aa8.8□□□□□ -1
VCAN-210ENST00000513960 CSF1P09603 554 aa8.8□□□□□ -1
VCAN-210ENST00000513960 RAB40ALP0C0E4 278 aa8.8□□□□□ -1
VCAN-210ENST00000513960 MGMTP16455 207 aa8.8□□□□□ -1
VCAN-210ENST00000513960 PBX2P40425 430 aa8.8□□□□□ -1
VCAN-210ENST00000513960 POU4F2Q12837 409 aa8.8□□□□□ -1
VCAN-210ENST00000513960 KIR2DS3Q14952 304 aa8.8□□□□□ -1
VCAN-210ENST00000513960 HFEQ30201 348 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ELFN2Q5R3F8 820 aa8.8□□□□□ -1
VCAN-210ENST00000513960 PWWP2BQ6NUJ5 590 aa8.8□□□□□ -1
VCAN-210ENST00000513960 JAGN1Q8N5M9 183 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ZNF615Q8N8J6 731 aa8.8□□□□□ -1
VCAN-210ENST00000513960 CAMKVQ8NCB2 501 aa8.8□□□□□ -1
VCAN-210ENST00000513960 RAB40AQ8WXH6 277 aa8.8□□□□□ -1
VCAN-210ENST00000513960 RERGQ96A58 199 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 ELSPBP1Q96BH3 223 aa8.8□□□□□ -1
VCAN-210ENST00000513960 PIGMQ9H3S5 423 aa8.8□□□□□ -1
VCAN-210ENST00000513960 C5orf42Q9H799 3197 aa8.79□□□□□ -1
VCAN-210ENST00000513960 COL4A3Q01955 1670 aa8.79□□□□□ -1
VCAN-210ENST00000513960 A0A0D9SG52 128 aa8.79□□□□□ -1
VCAN-210ENST00000513960 C1orf196B1AJZ1 125 aa8.79□□□□□ -1
VCAN-210ENST00000513960 SNAPINO95295 136 aa8.79□□□□□ -1
VCAN-210ENST00000513960 CYB5AP00167 134 aa8.79□□□□□ -1
VCAN-210ENST00000513960 IL5P05113 134 aa8.79□□□□□ -1
VCAN-210ENST00000513960 EN2P19622 333 aaPredicted RBP8.79□□□□□ -1
VCAN-210ENST00000513960 ITGA3P26006 1051 aa8.79□□□□□ -1
VCAN-210ENST00000513960 EIF2B1Q14232 305 aaKnown RBP8.79□□□□□ -1
VCAN-210ENST00000513960 CEBPEQ15744 281 aa8.79□□□□□ -1
VCAN-210ENST00000513960 CDNFQ49AH0 187 aa8.79□□□□□ -1
VCAN-210ENST00000513960 TRMT12Q53H54 448 aaKnown RBP8.79□□□□□ -1
VCAN-210ENST00000513960 KLHL26Q53HC5 615 aa8.79□□□□□ -1
VCAN-210ENST00000513960 PXKQ7Z7A4 578 aa8.79□□□□□ -1
VCAN-210ENST00000513960 MRGPREQ86SM8 312 aa8.79□□□□□ -1
VCAN-210ENST00000513960 KISS1RQ969F8 398 aaPredicted RBP8.79□□□□□ -1
VCAN-210ENST00000513960 C14orf79Q96F83 325 aa8.79□□□□□ -1
VCAN-210ENST00000513960 Q96M85 177 aa8.79□□□□□ -1
VCAN-210ENST00000513960 POTEKPQ9BYX7 375 aa8.79□□□□□ -1
VCAN-210ENST00000513960 SCN2AQ99250 2005 aa8.79□□□□□ -1
VCAN-210ENST00000513960 MDC1Q14676 2089 aaKnown RBP8.79□□□□□ -1
VCAN-210ENST00000513960 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.79□□□□□ -1
VCAN-210ENST00000513960 PRR19A6NJB7 356 aa8.79□□□□□ -1
VCAN-210ENST00000513960 CTNSO60931 367 aa8.79□□□□□ -1
VCAN-210ENST00000513960 AQP8O94778 261 aa8.79□□□□□ -1
VCAN-210ENST00000513960 KLF8O95600 359 aaPredicted RBP8.79□□□□□ -1
VCAN-210ENST00000513960 OR2T7P0C7T2 308 aa8.79□□□□□ -1
VCAN-210ENST00000513960 IL9P15248 144 aa8.79□□□□□ -1
VCAN-210ENST00000513960 FOSL2P15408 326 aa8.79□□□□□ -1
VCAN-210ENST00000513960 PPT1P50897 306 aa8.79□□□□□ -1
VCAN-210ENST00000513960 NFATC4Q14934 902 aa8.79□□□□□ -1
VCAN-210ENST00000513960 PEA15Q15121 130 aa8.79□□□□□ -1
VCAN-210ENST00000513960 FBXO42Q6P3S6 717 aa8.79□□□□□ -1
VCAN-210ENST00000513960 FIGLAQ6QHK4 219 aa8.79□□□□□ -1
VCAN-210ENST00000513960 RBMS3Q6XE24 437 aaKnown RBP8.79□□□□□ -1
VCAN-210ENST00000513960 STAC2Q6ZMT1 411 aa8.79□□□□□ -1
VCAN-210ENST00000513960 ABHD13Q7L211 337 aa8.79□□□□□ -1
VCAN-210ENST00000513960 FAM122BQ7Z309 247 aa8.79□□□□□ -1
VCAN-210ENST00000513960 OR1J4Q8NGS1 313 aa8.79□□□□□ -1
VCAN-210ENST00000513960 OR2T27Q8NH04 317 aa8.79□□□□□ -1
VCAN-210ENST00000513960 CCL4L1Q8NHW4 92 aa8.79□□□□□ -1
VCAN-210ENST00000513960 PPP1R1CQ8WVI7 109 aa8.79□□□□□ -1
VCAN-210ENST00000513960 ZBTB8AQ96BR9 441 aa8.79□□□□□ -1
VCAN-210ENST00000513960 HAVCR1Q96D42 359 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms