RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CSF2RBP32927 897 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 POU3F4P49335 361 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 FAM69BQ5VUD6 431 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 YOD1Q5VVQ6 348 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 FAM174AQ8TBP5 190 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 WBP2Q969T9 261 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 FAM3DQ96BQ1 224 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF251Q9BRH9 671 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ALG12Q9BV10 488 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 C1QTNF6Q9BXI9 259 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 PRSS16Q9NQE7 514 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 CPNE7Q9UBL6 633 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 B4GALT7Q9UBV7 327 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 KLK11Q9UBX7 282 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 PURGQ9UJV8 347 aaKnown RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 UBE2J1Q9Y385 318 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 BRWD1Q9NSI6 2320 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 A0A0A6YYC8 382 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 HMSDA8MTL9 139 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 I3L1I5 382 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 GFYI3L273 518 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SYT7O43581 403 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SLCO2B1O94956 709 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SYNGR4O95473 234 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 LPLP06858 475 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 LIMS3P0CW19 117 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 LIMS4P0CW20 117 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 F3P13726 295 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF28P17035 718 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 OTX2P32243 289 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ALKBH1Q13686 389 aaKnown RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 PRAMEF8Q5VWM4 474 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 PRAMEF7Q5VXH5 474 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 B3GNTL1Q67FW5 361 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM151BQ8IW70 566 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 DIO2Q92813 273 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 OR1F2PQ96R84 312 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 C20orf24Q9BUV8 137 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ST6GALNAC5Q9BVH7 336 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 PARPBPQ9NWS1 579 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 IL20Q9NYY1 176 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 NINQ8N4C6 2090 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SHROOM3Q8TF72 1996 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ARID1BQ8NFD5 2236 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF888P0CJ79 500 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 NPPBP16860 134 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 HSD11B2P80365 405 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 MRPL58Q14197 206 aaKnown RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 GPR18Q14330 331 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM244Q5VVB8 128 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 MRPL41Q8IXM3 137 aaKnown RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 KLHDC8BQ8IXV7 354 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ATOH1Q92858 354 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ARRDC3Q96B67 414 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 MACROD1Q9BQ69 325 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 MS4A8Q9BY19 250 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 A6NCN8 305 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 KDM4EB2RXH2 506 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 OR2T1O43869 369 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF765Q7L2R6 523 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 MAMDC2Q7Z304 686 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 OR13C5Q8NGS8 318 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 OR4K15Q8NH41 348 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 HAS2Q92819 552 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ABHD1Q96SE0 405 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ELOVL3Q9HB03 270 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 CSAG2Q9Y5P2 127 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SCN1AP35498 2009 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 TRBV5-3A0A0A0MS03 114 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 LOC100289279A0A1B0GTE1 492 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 NPIPA2E9PIF3 369 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 NPIPA3F8WFD2 350 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 RAD51DO75771 328 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SERPINA5P05154 406 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PNMTP11086 282 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PSMB6P28072 239 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 WNT3P56703 355 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 HTRA4P83105 476 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SFRP5Q5T4F7 317 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 RAET1LQ5VY80 246 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 C3orf33Q6P1S2 294 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 Q7L0L9 218 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 RHOUQ7L0Q8 258 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SLC16A13Q7RTY0 426 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 MDGA2Q7Z553 956 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 TMEFF1Q8IYR6 380 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 LINC00518Q8N0U6 118 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 STPG2Q8N412 459 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF709Q8N972 641 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 OR1J2Q8NGS2 313 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SCMH1Q96GD3 660 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 TAF9BQ9HBM6 251 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 CMC2Q9NRP2 79 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms