RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 MAP2K6P52564 334 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 RPL27P61353 136 aaKnown RBP11.48□□□□□ -0.57
COL11A1-210ENST00000512756 BRICD5Q6PL45 260 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 ZNF620Q6ZNG0 422 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 SYT9Q86SS6 491 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 CADM3Q8N126 398 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 GJC3Q8NFK1 279 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
COL11A1-210ENST00000512756 URB1O60287 2271 aaKnown RBP11.48□□□□□ -0.57
COL11A1-210ENST00000512756 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 SELENOFO60613 162 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PDGFAP04085 211 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 ELAVL1Q15717 326 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 LINC00346Q8IVM7 164 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 RIMKLAQ8IXN7 391 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PRSS35Q8N3Z0 413 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 ZNF845Q96IR2 970 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 DHCR7Q9UBM7 475 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 H7C1Q1 480 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 F2RL1P55085 397 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 MRPL58Q14197 206 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 EMC4Q5J8M3 183 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PRAMEF20Q5VT98 475 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 GRAMD2AQ8IUY3 354 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 SCARB1Q8WTV0 552 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 UTP23Q9BRU9 249 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 TCEAL2Q9H3H9 227 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PISDQ9UG56 409 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 MYO9BQ13459 2157 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 OR6C65A6NJZ3 312 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 DUSP8Q13202 625 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PFN4Q8NHR9 129 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 PKMYT1Q99640 499 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 ABHD6Q9BV23 337 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 QPCTLQ9NXS2 382 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 SAGE1Q9NXZ1 904 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 OR14J1Q9UGF5 321 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 MRPL19P49406 292 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 CSNK1EP49674 416 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 THBS3P49746 956 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 EBPQ15125 230 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 IAH1Q2TAA2 248 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 SECTM1Q8WVN6 248 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 RBPMSQ93062 196 aaKnown RBP11.47□□□□□ -0.57
COL11A1-210ENST00000512756 MUCL1Q96DR8 90 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 OR6C1Q96RD1 312 aa11.47□□□□□ -0.57
COL11A1-210ENST00000512756 A0A1W2PR48 441 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 ZNF814B7Z6K7 855 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 IL32P24001 234 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 PYCR3Q53H96 274 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 YOD1Q5VVQ6 348 aaPredicted RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 OLIG3Q7RTU3 272 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 OR2L13Q8N349 312 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 UHRF2Q96PU4 802 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 UBL7Q96S82 380 aaPredicted RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 SLC25A19Q9HC21 320 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 TRBV5-4A0A0C4DH59 114 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 A0A1B0GX78 115 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 LRP5LA4QPB2 252 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 M0QYG6 137 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 GLSO94925 669 aaPredicted RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 GIPP09681 153 aaPredicted RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 S100A7P31151 101 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 IRS1P35568 1242 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 CARD18P57730 90 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 RACK1P63244 317 aaKnown RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 MARCH3Q86UD3 253 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 SLC30A7Q8NEW0 376 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 DYNC2LI1Q8TCX1 351 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 SLC35A4Q96G79 324 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 ZNF223Q9UK11 482 aaPredicted RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 PRAMEF25A6NGN4 478 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 GPX5O75715 221 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 RFX2P48378 723 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 P2RX1P51575 399 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 PMPCAQ10713 525 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 LPAL2Q16609 132 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 TRMT12Q53H54 448 aaKnown RBP11.46□□□□□ -0.57
COL11A1-210ENST00000512756 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 LGI3Q8N145 548 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 SYS1Q8N2H4 156 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 OR5D18Q8NGL1 313 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 OR52A5Q9H2C5 316 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 FGF22Q9HCT0 170 aa11.46□□□□□ -0.57
COL11A1-210ENST00000512756 ABHD16AO95870 558 aa11.46□□□□□ -0.58
COL11A1-210ENST00000512756 BCKDHBP21953 392 aa11.46□□□□□ -0.58
COL11A1-210ENST00000512756 SOHLH1Q5JUK2 328 aa11.46□□□□□ -0.58
COL11A1-210ENST00000512756 GLIPR1L1Q6UWM5 242 aa11.46□□□□□ -0.58
COL11A1-210ENST00000512756 NAXDQ8IW45 347 aa11.46□□□□□ -0.58
COL11A1-210ENST00000512756 PLPP7Q8NBV4 271 aa11.46□□□□□ -0.58
COL11A1-210ENST00000512756 OR13H1Q8NG92 308 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms