RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TMEM54Q969K7 222 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 TXNDC15Q96J42 360 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 JMJD8Q96S16 334 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 EMC6Q9BV81 110 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 TMEM120AQ9BXJ8 343 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 LRMDAQ9H2I8 198 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 NANOGQ9H9S0 305 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 ZNF446Q9NWS9 450 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
VEGFA-216ENST00000512683 CENPBD1B2RD01 187 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 LRRN3E7EW58 273 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 FXYD1O00168 92 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 HPXP02790 462 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 THY1P04216 161 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 GAAP10253 952 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 ZNF250P15622 560 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 AHCYP23526 432 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 PCGF2P35227 344 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 RAD52P43351 418 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 LIMS1P48059 325 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 PTDSS1P48651 473 aaKnown RBP10.78□□□□□ -0.68
VEGFA-216ENST00000512683 CARD17Q5XLA6 110 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 WDR88Q6ZMY6 472 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 C1orf174Q8IYL3 243 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 OR10A6Q8NH74 314 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 CLDND2Q8NHS1 167 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 RNF217Q8TC41 542 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 C11orf40Q8WZ69 217 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 TAMM41Q96BW9 452 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 SLC25A44Q96H78 314 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-216ENST00000512683 MS4A3Q96HJ5 214 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 MPP4Q96JB8 637 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 MCHR1Q99705 422 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 SLC19A3Q9BZV2 496 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 TPK1Q9H3S4 243 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 METTL17Q9H7H0 456 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-216ENST00000512683 HINT3Q9NQE9 182 aaKnown RBP10.78□□□□□ -0.68
VEGFA-216ENST00000512683 MED29Q9NX70 200 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 GLTPQ9NZD2 209 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 ZNF224Q9NZL3 707 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 DUSP13Q9UII6 198 aa10.78□□□□□ -0.68
VEGFA-216ENST00000512683 IGLV3-9A0A075B6K5 115 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 LYNX1G3V0Z9 82 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 J3QLI3 93 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 PPIHO43447 177 aaKnown RBP10.77□□□□□ -0.69
VEGFA-216ENST00000512683 CHP2O43745 196 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SNAP29O95721 258 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 MT-ND5P03915 603 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ADORA3P0DMS8 318 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 LYNX1P0DP58 116 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 GATA3P23771 443 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 CFPP27918 469 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ALDH3B1P43353 468 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 LMO4P61968 165 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SRSF2Q01130 221 aaKnown RBP10.77□□□□□ -0.69
VEGFA-216ENST00000512683 MSMPQ1L6U9 139 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 RABL3Q5HYI8 236 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ENTPD8Q5MY95 495 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 RGS7BPQ6MZT1 257 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ACSM5Q6NUN0 579 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 TMEM53Q6P2H8 277 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SHQ1Q6PI26 577 aaKnown RBP10.77□□□□□ -0.69
VEGFA-216ENST00000512683 UNQ6126/PRO20091Q6UXV3 157 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 PATL1Q86TB9 770 aaKnown RBP10.77□□□□□ -0.69
VEGFA-216ENST00000512683 CALHM3Q86XJ0 350 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SLC30A8Q8IWU4 369 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SKA3Q8IX90 412 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SLC22A24Q8N4F4 322 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 C10orf53Q8N6V4 93 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF519Q8TB69 540 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 FAM216AQ8WUB2 273 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF566Q969W8 418 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 SYT3Q9BQG1 590 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 PCDHAC1Q9H158 963 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF275Q9NSD4 429 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-216ENST00000512683 FGFR1OP2Q9NVK5 253 aa10.77□□□□□ -0.69
VEGFA-216ENST00000512683 A0A1W2PPW3 197 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 CPSF4LA6NMK7 179 aaKnown RBP10.76□□□□□ -0.69
VEGFA-216ENST00000512683 C17orf100A8MU93 164 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 TRIM77I1YAP6 450 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 DHHO43323 396 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 RP2O75695 350 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 VENTXO95231 258 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 HIST1H2ABP04908 130 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 B4GALT1P15291 398 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 CRYBB2P43320 205 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 ARFIP2P53365 341 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SEC24CP53992 1094 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 PLP2Q04941 152 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 KLF10Q13118 480 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-216ENST00000512683 CCNIQ14094 377 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 RAB39AQ14964 217 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 VMACQ2NL98 169 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 SLC36A2Q495M3 483 aa10.76□□□□□ -0.69
VEGFA-216ENST00000512683 TMEM154Q6P9G4 183 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms