RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RGS8P57771 180 aaPredicted RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 MAGOHP61326 146 aaKnown RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 CDK6Q00534 326 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 POU3F1Q03052 451 aaPredicted RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 SCGB2A2Q13296 93 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 PMS2P3Q13401 168 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 SNTB2Q13425 540 aaKnown RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 ADRM1Q16186 407 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 GSG1Q2KHT4 349 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 VMACQ2NL98 169 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 CR1LQ2VPA4 569 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 TRMT5Q32P41 509 aaKnown RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 KRTAP24-1Q3LI83 254 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 SLC2A7Q6PXP3 512 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 MDP1Q86V88 176 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 RANBP3LQ86VV4 465 aaPredicted RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 C20orf196Q8IYI0 205 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 TMEM123Q8N131 208 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 SVOPLQ8N434 492 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 RFLNBQ8N5W9 214 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 C10orf53Q8N6V4 93 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 OR9I1Q8NGQ6 314 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 NFKBIDQ8NI38 313 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 CKAP2Q8WWK9 683 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 RCC1LQ96I51 464 aaKnown RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 DOK1Q99704 481 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 C19orf24Q9BVV8 132 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 NELFAQ9H3P2 528 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 MS4A5Q9H3V2 200 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 NOX3Q9HBY0 568 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 TCF7L2Q9NQB0 619 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 B3GAT1Q9P2W7 334 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 SEC14L4Q9UDX3 406 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 TESQ9UGI8 421 aaKnown RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 TMEFF2Q9UIK5 374 aaPredicted RBP6.2□□□□□ -1.42
USP46-208ENST00000512656 POFUT2Q9Y2G5 429 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 USH1CQ9Y6N9 552 aa6.2□□□□□ -1.42
USP46-208ENST00000512656 SVEP1Q4LDE5 3571 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 YLPM1P49750 1951 aaKnown RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 IGKV1D-42A0A075B6H8 117 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 A0A087WUJ7 227 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SH3PXD2BA1X283 911 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 M0R233 179 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 TCF21O43680 179 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SYNGR3O43761 229 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 ERLIN1O75477 346 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 UBL3O95164 117 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 OR6A2O95222 327 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 RAB36O95755 333 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 MT-ATP6P00846 226 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 HLA-HP01893 362 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 ADRA2AP08913 450 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 NR4A1P22736 598 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 APEX1P27695 318 aaKnown RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 HTR2AP28223 471 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 GIPRP48546 466 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SLURP1P55000 103 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SELENOVP59797 346 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 GALK2Q01415 458 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 PUDPQ08623 228 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SCARB2Q14108 478 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 LRIF1Q5T3J3 769 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 GKAP1Q5VSY0 366 aaPredicted RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 CARD17Q5XLA6 110 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 KRT80Q6KB66 452 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 EPGNQ6UW88 154 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 ZNF813Q6ZN06 617 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 IL17RELQ6ZVW7 336 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 ZNF627Q7L945 461 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 MAVSQ7Z434 540 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 PXKQ7Z7A4 578 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 ARMC8Q8IUR7 673 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 CDK20Q8IZL9 346 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 HIPK4Q8NE63 616 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 OR6N1Q8NGY5 312 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 MRPL24Q96A35 216 aaKnown RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 ZBTB9Q96C00 473 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 TLCD1Q96CP7 247 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SPDL1Q96EA4 605 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SLC41A3Q96GZ6 507 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 TMEM43Q9BTV4 400 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 ULBP2Q9BZM5 246 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 TMEM38AQ9H6F2 299 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 SEC61A2Q9H9S3 476 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 B3GNT2Q9NY97 397 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 MRPL39Q9NYK5 338 aaKnown RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 ZNF346Q9UL40 294 aaKnown RBP6.19□□□□□ -1.42
USP46-208ENST00000512656 GMEB1Q9Y692 573 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 MGAM2Q2M2H8 2515 aa6.19□□□□□ -1.42
USP46-208ENST00000512656 A0A0B4J2E0 115 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 A0A1B0GX12 115 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 TMEM129A0AVI4 362 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 LRP5LA4QPB2 252 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 B4DSR2 109 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 MS4A18H0YCH9 400 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 PLPP3O14495 311 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 FMO6PO60774 539 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 SEC14L2O76054 403 aa6.18□□□□□ -1.42
USP46-208ENST00000512656 HPRP00739 348 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms