RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PRSS37A4D1T9 235 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 LIPT2A6NK58 231 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 GATBO75879 557 aaKnown RBP11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 CRABP1P29762 137 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ACVR1BP36896 505 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 NAA10P41227 235 aaPredicted RBP11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 OR12D2P58182 307 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 SIRPAP78324 504 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 PUDPQ08623 228 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 SELENBP1Q13228 472 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 CDK5R1Q15078 307 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ACKR1Q16570 336 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ZNF239Q16600 458 aaKnown RBP11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ZNF684Q5T5D7 378 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 H3F3CQ6NXT2 135 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 C3orf33Q6P1S2 294 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ARSKQ6UWY0 536 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 TMEM91Q6ZNR0 172 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 CDC20BQ86Y33 519 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 PLCZ1Q86YW0 608 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 TIGD4Q8IY51 512 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 NEIL3Q8TAT5 605 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ZPLD1Q8TCW7 415 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 ACOT12Q8WYK0 555 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 SMIM19Q96E16 107 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 KLHL15Q96M94 604 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 SLC30A2Q9BRI3 323 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 CCDC32Q9BV29 185 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 MROQ9BYG7 248 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 OR11A1Q9GZK7 315 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 CMAHPQ9Y471 501 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 NBASA2RRP1 2371 aa11.79□□□□□ -0.52
DEPDC1B-206ENST00000512452 B4DXG7 233 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 CASKO14936 926 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 ARHGEF9O43307 516 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 SELENOFO60613 162 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 TMEM127O75204 238 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 UPK1BO75841 260 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 SC5DO75845 299 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 TCN2P20062 427 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 PYCR1P32322 319 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 EGR3Q06889 387 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 HNRNPA0Q13151 305 aaKnown RBP11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 GLYR1Q49A26 553 aaPredicted RBP11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 SLC22A10Q63ZE4 541 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 OR5M10Q6IEU7 315 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 JMJD6Q6NYC1 403 aaPredicted RBP11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 DNM1P34Q6PK57 102 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 ARL9Q6T311 187 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 TIPARPQ7Z3E1 657 aaKnown RBP11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 HDDC2Q7Z4H3 204 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 PXKQ7Z7A4 578 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 GTPBP8Q8N3Z3 284 aaPredicted RBP11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 ABHD4Q8TB40 342 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 POC1BQ8TC44 478 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 ZNRF4Q8WWF5 429 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 ASB17Q8WXJ9 295 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 KCTD12Q96CX2 325 aaKnown RBP11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 PELI1Q96FA3 418 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 TMEM41AQ96HV5 264 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 PGLYRP3Q96LB9 341 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 HDHD5Q9BXW7 423 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 CDCP1Q9H5V8 836 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 WDR76Q9H967 626 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 ZNF160Q9HCG1 818 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 SACM1LQ9NTJ5 587 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 HDGFL3Q9Y3E1 203 aa11.78□□□□□ -0.52
DEPDC1B-206ENST00000512452 LRBAP50851 2863 aa11.77□□□□□ -0.52
DEPDC1B-206ENST00000512452 TRAV1-2A0A0B4J238 106 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 LOC102725191A0A1B0GVB3 256 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 A0A1B0GVG6 124 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 C2orf72A6NCS6 295 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 ANKRD61A6NGH8 418 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 C9orf172C9J069 976 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 C11orf98E9PRG8 122 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 MS4A18H0YCH9 400 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 CDK2AP1O14519 115 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 SNPHO15079 494 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 SERPINI2O75830 405 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 SERPINA7P05543 415 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 FAM87AP0C7U9 286 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 ZNF17P17021 662 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 AHCYP23526 432 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 MYL9P24844 172 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 PTBP1P26599 531 aaKnown RBP eCLIP11.77□□□□□ -0.535e-8■■■■■ 26.9
DEPDC1B-206ENST00000512452 TNFSF8P32971 234 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 DSCR4P56555 118 aaPredicted RBP11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 PPP3R1P63098 170 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 OR7A5Q15622 319 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 MS4A18Q3C1V0 323 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 DDI2Q5TDH0 399 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 BICRALQ6AI39 1079 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 MZT2AQ6P582 158 aa11.77□□□□□ -0.53
DEPDC1B-206ENST00000512452 IL20RBQ6UXL0 311 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms