RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NANOGP8Q6NSW7 305 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 HACD2Q6Y1H2 254 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 C9orf139Q6ZV77 190 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 OLIG3Q7RTU3 272 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 SZRD1Q7Z422 152 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 RNF130Q86XS8 419 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ARHGAP24Q8N264 748 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ZNF614Q8N883 585 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 OR56A1Q8NGH5 318 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 SLC25A43Q8WUT9 341 aaPredicted RBP7.71□□□□□ -1.17
NUP54-211ENST00000512151 ST8SIA1Q92185 356 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 MOAP1Q96BY2 351 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 SLC35G5Q96KT7 338 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 OR7D2Q96RA2 312 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 CHIAQ9BZP6 476 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 LAT2Q9GZY6 243 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 C1orf21Q9H246 121 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 OR51I1Q9H343 314 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 NANOGQ9H9S0 305 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 CMTM6Q9NX76 183 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ASH2LQ9UBL3 628 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 KCNE5Q9UJ90 142 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 HDGFL3Q9Y3E1 203 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 DTNAQ9Y4J8 743 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 GMEB1Q9Y692 573 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 HYDINQ4G0P3 5121 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 NUP214P35658 2090 aaPredicted RBP7.71□□□□□ -1.18
NUP54-211ENST00000512151 C5orf63A6NC05 138 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 ZNF587BE7ETH6 402 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 H3BNH8 94 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 NME4O00746 187 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 CYP7B1O75881 506 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 NPPAP01160 153 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 OPN1MWP04001 364 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 CSF1P09603 554 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 OPN1MW2P0DN77 364 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 OPN1MW3P0DN78 364 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 OR12D1P0DN82 309 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 ETFAP13804 333 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 GPX2P18283 190 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 CHI3L1P36222 383 aaPredicted RBP7.71□□□□□ -1.18
NUP54-211ENST00000512151 RAD52P43351 418 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 SELENOPP49908 381 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 PSME3P61289 254 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 ARF1P84077 181 aaKnown RBP7.71□□□□□ -1.18
NUP54-211ENST00000512151 FUT5Q11128 374 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 RGNQ15493 299 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 FXNQ16595 210 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 C2orf68Q2NKX9 166 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 DEFB112Q30KQ8 113 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 DNAL1Q4LDG9 190 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 PDZK1Q5T2W1 519 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 TNFAIP8L2Q6P589 184 aaPredicted RBP7.71□□□□□ -1.18
NUP54-211ENST00000512151 ZCCHC12Q6PEW1 402 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 SLC15A3Q8IY34 581 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 TRIML2Q8N7C3 387 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 PCYOX1LQ8NBM8 494 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 RBM15BQ8NDT2 890 aaKnown RBP7.71□□□□□ -1.18
NUP54-211ENST00000512151 OR9K2Q8NGE7 335 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 MIPOL1Q8TD10 442 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 ROPN1LQ96C74 230 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 TSPAN32Q96QS1 320 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 ACTRT3Q9BYD9 372 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 HOXD1Q9GZZ0 328 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 GID8Q9NWU2 228 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 TMEM181Q9P2C4 612 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 SEC14L4Q9UDX3 406 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.71□□□□□ -1.18
NUP54-211ENST00000512151 CHRNA9Q9UGM1 479 aa7.71□□□□□ -1.18
NUP54-211ENST00000512151 IGHV1-69-2A0A0G2JMI3 117 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 SRRM5B3KS81 715 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 HMGN4O00479 90 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 KRT33AO76009 404 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 KRT75O95678 551 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 CLPTM1O96005 669 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PLATP00750 562 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 CRYBA1P05813 215 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 BMP2P12643 396 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 ZNF35P13682 527 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 ATP6V1C1P21283 382 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PAX7P23759 505 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 CRYBB2P43320 205 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 SEC61A1P61619 476 aaKnown RBP7.7□□□□□ -1.18
NUP54-211ENST00000512151 SYPL1Q16563 259 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 DCST2Q5T1A1 773 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PAQR6Q6TCH4 344 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 CALHM3Q86XJ0 350 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PTOV1Q86YD1 416 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PARP8Q8N3A8 854 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 TMEM99Q8N816 258 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 MCUR1Q96AQ8 359 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 ZNF837Q96EG3 531 aaPredicted RBP7.7□□□□□ -1.18
NUP54-211ENST00000512151 ZNF75AQ96N20 296 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 ZNF583Q96ND8 569 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 GAL3ST1Q99999 423 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 HOPXQ9BPY8 73 aaPredicted RBP7.7□□□□□ -1.18
NUP54-211ENST00000512151 PIGUQ9H490 435 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PRDM13Q9H4Q3 707 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 PIF1Q9H611 641 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms