RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	MED20	Q9H944	212 aa		12.8	□□□□□ -0.36
MATR3-238	ENST00000512107	SLC25A19	Q9HC21	320 aa		12.8	□□□□□ -0.36
MATR3-238	ENST00000512107	GLTP	Q9NZD2	209 aa		12.8	□□□□□ -0.36
MATR3-238	ENST00000512107	COQ3	Q9NZJ6	369 aa		12.8	□□□□□ -0.36
MATR3-238	ENST00000512107	UGT2A1	Q9Y4X1	527 aa		12.8	□□□□□ -0.36
MATR3-238	ENST00000512107	UTP20	O75691	2785 aa	Known RBP	12.8	□□□□□ -0.36
MATR3-238	ENST00000512107	SLC22A23	A1A5C7	686 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107		A1L4Q6	167 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNF503-AS2	A6NEH8	195 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNF726	A6NNF4	738 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	LYZL6	O75951	148 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	QDPR	P09417	244 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	CLU	P10909	449 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	COX5A	P20674	150 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	AGA	P20933	346 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	NOS3	P29474	1203 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ASCL1	P50553	236 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	DAP3	P51398	398 aa	Known RBP	12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNF133	P52736	654 aa	Predicted RBP	12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ROR2	Q01974	943 aa	Known RBP	12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	3e-7	■■□□□ 12.2
MATR3-238	ENST00000512107	NPRL3	Q12980	569 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	CEACAM16	Q2WEN9	425 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	SLC25A35	Q3KQZ1	300 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	FBXL19-AS1	Q494R0	122 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	C12orf73	Q69YU5	71 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	XKRX	Q6PP77	449 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107		Q6ZT83	130 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	UBE2J2	Q8N2K1	259 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	OR52E2	Q8NGJ4	325 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	CA5BP1	Q8WTZ4	195 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	MCHR2	Q969V1	340 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	EME1	Q96AY2	570 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNF556	Q9HAH1	456 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	GRHPR	Q9UBQ7	328 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	AASS	Q9UDR5	926 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	MALT1	Q9UDY8	824 aa		12.79	□□□□□ -0.36
MATR3-238	ENST00000512107	PRSS37	A4D1T9	235 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	FAM183A	A6NL82	134 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	FAM171A2	A8MVW0	826 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	PSKH1	P11801	424 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	APEH	P13798	732 aa	Known RBP	12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	CTLA4	P16410	223 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	CDA	P32320	146 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	GRK5	P34947	590 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	CSNK1A1	P48729	337 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	RPS6KA3	P51812	740 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	ARF1	P84077	181 aa	Known RBP	12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	EFNB1	P98172	346 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	CRMP1	Q14194	572 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	SLX4IP	Q5VYV7	408 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	HIST2H2BC	Q6DN03	193 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	LEG1	Q6P5S2	330 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	LYPD4	Q6UWN0	246 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	BBS1	Q8NFJ9	593 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	FGFBP3	Q8TAT2	258 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	TEX47	Q8TBZ9	253 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	NSMAF	Q92636	917 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	ZNF566	Q969W8	418 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	LRR1	Q96L50	414 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	ADAD1	Q96M93	576 aa	Known RBP	12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	GRIP2	Q9C0E4	1043 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	CRLF2	Q9HC73	371 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	PARPBP	Q9NWS1	579 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	VSX1	Q9NZR4	365 aa	Predicted RBP	12.78	□□□□□ -0.36
MATR3-238	ENST00000512107	GPR52	Q9Y2T5	361 aa		12.78	□□□□□ -0.36
MATR3-238	ENST00000512107		A0A1W2PR80	420 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	RPL36A-HNRNPH2	H7BZ11	118 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	SURF4	O15260	269 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	PRKY	O43930	277 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	MPZL1	O95297	269 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	IGHG1	P01857	330 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	THBD	P07204	575 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	CDH2	P19022	906 aa	Predicted RBP	12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	COL8A1	P27658	744 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	PYCR1	P32322	319 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	CD79B	P40259	229 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	CLRN1	P58418	232 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	TUBA1B	P68363	451 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	TUBA4A	P68366	448 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	TAF11	Q15544	211 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	GABRA6	Q16445	453 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	SFRP5	Q5T4F7	317 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	GPR139	Q6DWJ6	353 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	RPL13AP3	Q6NVV1	102 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	SEZ6L2	Q6UXD5	910 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	TUBA1A	Q71U36	451 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	OR6V1	Q8N148	313 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	WDR31	Q8NA23	367 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	OR2T33	Q8NG76	320 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	OR52L1	Q8NGH7	329 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	OR9Q1	Q8NGQ5	310 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	OR6N1	Q8NGY5	312 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	BCL2L2	Q92843	193 aa	Predicted RBP	12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	RNASE6	Q93091	150 aa	Known RBP	12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	PTP4A1	Q93096	173 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	NABP1	Q96AH0	204 aa		12.77	□□□□□ -0.37
MATR3-238	ENST00000512107	NMNAT2	Q9BZQ4	307 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms