RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CACNA1HO95180 2353 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 A0A0D9SEW6 157 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 MS4A18H0YCH9 400 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 J3QL48 77 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 UBDO15205 165 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SYNGR3O43761 229 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SCGNO76038 276 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 TTC4O95801 387 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 APODP05090 189 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 EPXP11678 715 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 HLA-EP13747 358 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 CSKP41240 450 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SRP9P49458 86 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 AQP4P55087 323 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 UBE2MP61081 183 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 HMGCS1Q01581 520 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 CRYZQ08257 329 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 GRIK2Q13002 908 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SKP2Q13309 424 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 EIF4EBP2Q13542 120 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 EXOSC2Q13868 293 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 GANABQ14697 944 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 ACSM3Q53FZ2 586 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 LY6G6FQ5SQ64 297 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM215Q68D42 235 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 CGB2Q6NT52 195 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 UGT3A1Q6NUS8 523 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 ANKRD16Q6P6B7 361 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 STRADAQ7RTN6 431 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SPATA6LQ8N4H0 392 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 LILRA3Q8N6C8 439 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 MFSD9Q8NBP5 474 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 C2CD4AQ8NCU7 369 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR9A4Q8NGU2 314 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR10K1Q8NGX5 313 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR4Q3Q8NH05 313 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 AJUBAQ96IF1 538 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 PSMB7Q99436 277 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SEPHS2Q99611 448 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC38A3Q99624 504 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 ALG8Q9BVK2 526 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 WDR41Q9HAD4 459 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 EML4Q9HC35 981 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 INPP5EQ9NRR6 644 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 IMPAD1Q9NX62 359 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZDHHC2Q9UIJ5 367 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 CDC42EP3Q9UKI2 254 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 RAB26Q9ULW5 256 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 ICAM5Q9UMF0 924 aa4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 HELZP42694 1942 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-208ENST00000511955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 hCG_38984A0A1B0GV85 526 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 G3V3Y1 287 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 J3QRK9 145 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 K7EQS6 105 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 POP7O75817 140 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 EIF3GO75821 320 aaKnown RBP eCLIP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PROSCO94903 275 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PAPSS2O95340 614 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 KLF8O95600 359 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 IFNW1P05000 195 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CDK1P06493 297 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ADRB1P08588 477 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SMIM6P0DI80 62 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 AOC1P19801 751 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 EPHA2P29317 976 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CCKBRP32239 447 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 KIR3DL1P43629 444 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MAP2K4P45985 399 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 RFX3P48380 749 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MARCKSL1P49006 195 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF134P52741 427 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR4P57081 412 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLDN2P57739 230 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TPI1P60174 286 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 NUTF2P61970 127 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 RANP62826 216 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 DYNLT1P63172 113 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MRPS11P82912 194 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRR20EP86478 221 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRR20CP86479 221 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRR20DP86480 221 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRR20BP86481 221 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRR20AP86496 221 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 DNASE1L3Q13609 305 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF846Q147U1 533 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 INPP5JQ15735 1006 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 GABRA6Q16445 453 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MEP1AQ16819 746 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 AGAP6Q5VW22 663 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ELP2Q6IA86 826 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM45BPQ6NSW5 357 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM71F2Q6NXP2 309 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CENPUQ71F23 418 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MEPCEQ7L2J0 689 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC16A14Q7RTX9 510 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ADGRG3Q86Y34 549 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SIDT2Q8NBJ9 832 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TXNDC5Q8NBS9 432 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM98AQ8NCA5 519 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms