RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MMP15P51511 669 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 CRISP3P54108 245 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 GTDC1Q4AE62 458 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 C16orf87Q6PH81 154 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 LRFN4Q6PJG9 635 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 TRIML2Q8N7C3 387 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 MNS1Q8NEH6 495 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 ST7LQ8TDW4 575 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 UBLCP1Q8WVY7 318 aaPredicted RBP16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 GEMIN6Q8WXD5 167 aaKnown RBP16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 TMEM54Q969K7 222 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 CCT8L2Q96SF2 557 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 MMP27Q9H306 513 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 CDH20Q9HBT6 801 aa16.03■□□□□ 0.16
HMGCS1-206ENST00000511774 MFN2O95140 757 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 SNAP29O95721 258 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 KNG1P01042 644 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 NUDT7P0C024 238 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 CSNK1A1P48729 337 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 PUDPQ08623 228 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 PMS2P3Q13401 168 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 SPATA46Q5T0L3 261 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 NET1Q7Z628 596 aaPredicted RBP16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 VPS33AQ96AX1 596 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 PKNOX2Q96KN3 472 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 OR52E6Q96RD3 313 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 RHOXF2Q9BQY4 288 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 MS4A7Q9GZW8 240 aaPredicted RBP16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 C12orf10Q9HB07 376 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 TMEM38BQ9NVV0 291 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 EGFL7Q9UHF1 273 aa16.02■□□□□ 0.16
HMGCS1-206ENST00000511774 DOCK11Q5JSL3 2073 aa16.02■□□□□ 0.15
HMGCS1-206ENST00000511774 FAM181BA6NEQ2 426 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 ZNF726A6NNF4 738 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 PLPP3O14495 311 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 CD80P33681 288 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 CRATP43155 626 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 SLC6A9P48067 706 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 BIDP55957 195 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 DSTNP60981 165 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 FAM209AQ5JX71 171 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 ASPHD2Q6ICH7 369 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 C9orf139Q6ZV77 190 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 IPCEF1Q8WWN9 437 aaPredicted RBP16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 CALML5Q9NZT1 146 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 RPS6KB2Q9UBS0 482 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 ZNF232Q9UNY5 417 aa16.01■□□□□ 0.15
HMGCS1-206ENST00000511774 A0A0G2JPF8 293 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 TLDC2A0PJX2 215 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 HNRNPCL2B2RXH8 293 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 HNRNPCL3B7ZW38 293 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 HOXA3O43365 443 aaPredicted RBP16■□□□□ 0.15
HMGCS1-206ENST00000511774 HNRNPCL1O60812 293 aaKnown RBP16■□□□□ 0.15
HMGCS1-206ENST00000511774 KRT75O95678 551 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 SBK2P0C263 348 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 HNRNPCL4P0DMR1 293 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 LBPP18428 481 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 WNT5AP41221 380 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 ETV4P43268 484 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 PAX8Q06710 450 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 C5orf46Q6UWT4 87 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 ZNF101Q8IZC7 436 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 PARP8Q8N3A8 854 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 LSMEM1Q8N8F7 131 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 SCAIQ8N9R8 606 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 OR4K5Q8NGD3 323 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 OR1J1Q8NGS3 322 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 DCLRE1CQ96SD1 692 aaKnown RBP16■□□□□ 0.15
HMGCS1-206ENST00000511774 SORT1Q99523 831 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 RBM4BQ9BQ04 359 aaKnown RBP16■□□□□ 0.15
HMGCS1-206ENST00000511774 WFDC6Q9BQY6 131 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 NUF2Q9BZD4 464 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 BCL2L14Q9BZR8 327 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 PPCSQ9HAB8 311 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 PATZ1Q9HBE1 687 aaKnown RBP16■□□□□ 0.15
HMGCS1-206ENST00000511774 MRPL39Q9NYK5 338 aaKnown RBP16■□□□□ 0.15
HMGCS1-206ENST00000511774 GLTPQ9NZD2 209 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 NPTNQ9Y639 398 aa16■□□□□ 0.15
HMGCS1-206ENST00000511774 C11orf98E9PRG8 122 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 F5H0A9 414 aaPredicted RBP15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 PLATP00750 562 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 DRD4P21917 467 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 RAG2P55895 527 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 PAX2Q02962 417 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 ALG10BQ5I7T1 473 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 THEM4Q5T1C6 240 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 BRICD5Q6PL45 260 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 C17orf107Q6ZR85 190 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 PXKQ7Z7A4 578 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 SNX32Q86XE0 403 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 CPEB3Q8NE35 698 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 OR6S1Q8NH40 331 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 MAL2Q969L2 176 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 MARS2Q96GW9 593 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 RNF121Q9H920 327 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 AIG1Q9NVV5 245 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 C1RLQ9NZP8 487 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 IFT52Q9Y366 437 aa15.99■□□□□ 0.15
HMGCS1-206ENST00000511774 A8MXK9 166 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms