RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 KIR2DL5BQ8NHK3 375 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 CXorf40AQ8TE69 158 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 ARPC1AQ92747 370 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 PKNOX2Q96KN3 472 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 OPALINQ96PE5 141 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 ROGDIQ9GZN7 287 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 CLSTN2Q9H4D0 955 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 SIAEQ9HAT2 523 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 CCL28Q9NRJ3 127 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 LGALS13Q9UHV8 139 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 ING4Q9UNL4 249 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC25A15Q9Y619 301 aa3.86□□□□□ -1.79
HMGB1P47-201ENST00000511281 A0A0B4J2A0 478 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 IGKV1D-13A0A0B4J2D9 117 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 A0A0G2JN53 185 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 IGKV1-13P0DP09 117 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 PRKACAP17612 351 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 MSR1P21757 451 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 BTCP35070 178 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 RAB11AP62491 216 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 SF3A2Q15428 464 aaKnown RBP3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 NSDHLQ15738 373 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 RAB11BQ15907 218 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 NRF1Q16656 503 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 HIKESHIQ53FT3 197 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 PPM1LQ5SGD2 360 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 TTC19Q6DKK2 380 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 SPINK14Q6IE38 97 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 HDDC2Q7Z4H3 204 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 HSD17B11Q8NBQ5 300 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 ZNF740Q8NDX6 193 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR10R2Q8NGX6 335 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 PIK3IP1Q96FE7 263 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC35E1Q96K37 410 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 HRASLS2Q9NWW9 162 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 AHSPQ9NZD4 102 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 PTTG3PQ9NZH4 202 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 SHPKQ9UHJ6 478 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 MSH6P52701 1360 aa3.85□□□□□ -1.79
HMGB1P47-201ENST00000511281 CHD4Q14839 1912 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 GLYATL1P3A0A0U1RQE8 302 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 FAM231BA6NCW3 169 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 GABRR3A8MPY1 467 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 A8MUA0 341 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 SCAMP2O15127 329 aaKnown RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 FAM189A1O60320 539 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 CLIC3O95833 236 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 SNAI1O95863 264 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 C6orf47O95873 294 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 CRYGCP07315 174 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 FOLR1P15328 257 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 TNFSF9P41273 254 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 RAD51Q06609 339 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC1A5Q15758 541 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 SOHLH1Q5JUK2 328 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 OR52W1Q6IF63 320 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 SPESP1Q6UW49 350 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 RALGPS2Q86X27 583 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 CMTM1Q8IZ96 169 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 JAGN1Q8N5M9 183 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 TTC29Q8NA56 475 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 SLC7A13Q8TCU3 470 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 RPUSD4Q96CM3 377 aaKnown RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 MAGEB18Q96M61 343 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 JSRP1Q96MG2 331 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 IL22Q9GZX6 179 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 BLZF1Q9H2G9 400 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 RGCCQ9H4X1 137 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 UGT1A7Q9HAW7 530 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 UGT1A8Q9HAW9 530 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 CYP3A43Q9HB55 503 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 RPS10P5Q9NQ39 176 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 CCDC59Q9P031 241 aaKnown RBP3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 KIF25-AS1Q9Y6Z4 181 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 MROH7-TTC4A0A0A0MT08 1334 aa3.84□□□□□ -1.79
HMGB1P47-201ENST00000511281 COL2A1P02458 1487 aaPredicted RBP3.84□□□□□ -1.8
HMGB1P47-201ENST00000511281 A0A1B0GVI7 797 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 FAM25EA8MYX2 175 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 PPP1R2P9O14990 202 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 SUPT7LO94864 414 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 SERPINA5P05154 406 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 GKN3PP0CG01 181 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 IGHV3-43DP0DP04 118 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 SRMP19623 302 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 SERPINB5P36952 375 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 CCR8P51685 355 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 FZD2Q14332 565 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 NCF4Q15080 339 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 OTPQ5XKR4 325 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 CNIH2Q6PI25 160 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 RNF165Q6ZSG1 346 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZBED8Q8IZ13 594 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR2G3Q8NGZ4 309 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 LINC01006Q8NI28 216 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 LYPD6BQ8NI32 183 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 CAPSLQ8WWF8 208 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF707Q96C28 371 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 LRRC58Q96CX6 371 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 MED8Q96G25 268 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms