RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PPP6CO00743 305 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 DYNC1I1O14576 645 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 PGRMC2O15173 223 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 OR5F1O95221 314 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 GBAP04062 536 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 LCATP04180 440 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 PRKCAP17252 672 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 EPHA3P29320 983 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 S100GP29377 79 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ACVR1BP36896 505 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 SLC1A6P48664 564 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 POLR2JP52435 117 aaKnown RBP2.5□□□□□ -2.01
CLOCK-209ENST00000511124 UGT2B15P54855 530 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 C21orf58P58505 322 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 VSNL1P62760 191 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 GLO1Q04760 184 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ZP4Q12836 540 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 SCARB2Q14108 478 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 KPNB1Q14974 876 aaKnown RBP2.5□□□□□ -2.01
CLOCK-209ENST00000511124 MICBQ29980 383 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF260Q3ZCT1 412 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 TRMT12Q53H54 448 aaKnown RBP2.5□□□□□ -2.01
CLOCK-209ENST00000511124 RABL3Q5HYI8 236 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 C6orf52Q5T4I8 152 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 METTL21CQ5VZV1 264 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 VWA1Q6PCB0 445 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 TRMT10BQ6PF06 316 aaKnown RBP2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF551Q7Z340 670 aaPredicted RBP2.5□□□□□ -2.01
CLOCK-209ENST00000511124 C1QL2Q7Z5L3 287 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF283Q8N7M2 679 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 WFDC11Q8NEX6 87 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 C8orf46Q8TAG6 207 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 MIPOL1Q8TD10 442 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 APIPQ96GX9 242 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 TECTBQ96PL2 329 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 SNX18Q96RF0 628 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF347Q96SE7 839 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM79Q9BSE2 394 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 MUC13Q9H3R2 512 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 TPT1P8Q9HAU6 139 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 GALNT9Q9HCQ5 603 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 PAK1IP1Q9NWT1 392 aaPredicted RBP2.5□□□□□ -2.01
CLOCK-209ENST00000511124 MKS1Q9NXB0 559 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 RNF7Q9UBF6 113 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF229Q9UJW7 825 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 RNF150Q9ULK6 438 aa2.5□□□□□ -2.01
CLOCK-209ENST00000511124 LOC105371242A0A075B767 164 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 LGALS8O00214 317 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 SGCEO43556 437 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 NRP2O60462 931 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 RGS9O75916 674 aaPredicted RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 BPNT1O95861 308 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 TGM6O95932 706 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 AVPP01185 164 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 NR4A1P22736 598 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 GABRA5P31644 462 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PITPNBP48739 271 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PGGT1BP53609 377 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 DLX5P56178 289 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 RPS7P62081 194 aaKnown RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 GRB2P62993 217 aaKnown RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PRR20EP86478 221 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PRR20CP86479 221 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PRR20DP86480 221 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PRR20BP86481 221 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PRR20AP86496 221 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 TRAF3Q13114 568 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 LTB4RQ15722 352 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF829Q3KNS6 432 aaPredicted RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 RNF220Q5VTB9 566 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 CARD17Q5XLA6 110 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 DHRS4L2Q6PKH6 230 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 C16orf54Q6UWD8 224 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 Q71RC1 249 aaPredicted RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 HDXQ7Z353 690 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 Q8NFD4 153 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 OR8J2Q8NGG1 315 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 NDNFQ8TB73 568 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 TEX47Q8TBZ9 253 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 RPS4Y2Q8TD47 263 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 GEMIN6Q8WXD5 167 aaKnown RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 CCL17Q92583 94 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 NEURL3Q96EH8 262 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 SLC25A44Q96H78 314 aaPredicted RBP2.49□□□□□ -2.01
CLOCK-209ENST00000511124 SDF2Q99470 211 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PITX2Q99697 317 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 UBQLN3Q9H347 655 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 PLEKHF2Q9H8W4 249 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 TCF7L2Q9NQB0 619 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 DEPPQ9NTK1 212 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 JKAMPQ9P055 326 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 CSAG2Q9Y5P2 127 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 SLC35F4A4IF30 521 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 NPIPB8E9PQR5 432 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 ATP6V1G2-DDX39BF2Z307 99 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 CLIC1O00299 241 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 JTBO76095 146 aa2.49□□□□□ -2.01
CLOCK-209ENST00000511124 SIX3O95343 332 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms