RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 LRFN4Q6PJG9 635 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 UGT2A3Q6UWM9 527 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 HDXQ7Z353 690 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 NANOGNBQ7Z5D8 188 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 FGFBP3Q8TAT2 258 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 STON2Q8WXE9 905 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 TAMM41Q96BW9 452 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 ECSITQ9BQ95 431 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 ZNF385DQ9H6B1 395 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 SLC7A8Q9UHI5 535 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 TMEFF2Q9UIK5 374 aaPredicted RBP13.24□□□□□ -0.29
TPM3-219ENST00000509409 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 SLC22A23A1A5C7 686 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 MCIDASD6RGH6 385 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 EDF1O60869 148 aaKnown RBP13.23□□□□□ -0.29
TPM3-219ENST00000509409 IGHG1P01857 330 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 COL8A2P25067 703 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 GPR6P46095 362 aaPredicted RBP13.23□□□□□ -0.29
TPM3-219ENST00000509409 MAD2L1BPQ15013 274 aaPredicted RBP13.23□□□□□ -0.29
TPM3-219ENST00000509409 VMACQ2NL98 169 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 ALKBH6Q3KRA9 238 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 MMEL1Q495T6 779 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 REP15Q6BDI9 236 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 RGS7BPQ6MZT1 257 aaPredicted RBP13.23□□□□□ -0.29
TPM3-219ENST00000509409 NANOGP8Q6NSW7 305 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 SLC16A14Q7RTX9 510 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 CARM1Q86X55 608 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 RDH5Q92781 318 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 SH3GL1Q99961 368 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 SLC19A3Q9BZV2 496 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 NANOGQ9H9S0 305 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 CDH20Q9HBT6 801 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 TMEM38BQ9NVV0 291 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 SH3GLB1Q9Y371 365 aa13.23□□□□□ -0.29
TPM3-219ENST00000509409 PTHP01270 115 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 HPXP02790 462 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 F13BP05160 661 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 ASAH2BP0C7U1 165 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 FAM157BP0CG42 384 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 NAT2P11245 290 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 FUT1P19526 365 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 ZNF84P51523 738 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 TAS2R41P59536 307 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 MYBPC1Q00872 1141 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 PLP2Q04941 152 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 FXNQ16595 210 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 NKPD1Q17RQ9 610 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 ELFN2Q5R3F8 820 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 METTL21CQ5VZV1 264 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 CCDC80Q76M96 950 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 TSPYL5Q86VY4 417 aaPredicted RBP13.22□□□□□ -0.29
TPM3-219ENST00000509409 SYT14Q8NB59 555 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 SLC30A7Q8NEW0 376 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 MCHR2Q969V1 340 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 SIKE1Q9BRV8 207 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 C19orf24Q9BVV8 132 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 KCNN2Q9H2S1 579 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 OR51B6Q9H340 312 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 NARFLQ9H6Q4 476 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 TAAR3PQ9P1P4 343 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 MYEF2Q9P2K5 600 aaKnown RBP13.22□□□□□ -0.29
TPM3-219ENST00000509409 GPR160Q9UJ42 338 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 ZNF346Q9UL40 294 aaKnown RBP13.22□□□□□ -0.29
TPM3-219ENST00000509409 MALRD1Q5VYJ5 2156 aa13.22□□□□□ -0.29
TPM3-219ENST00000509409 IQCMA0A1B0GVH7 501 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 PPIHO43447 177 aaKnown RBP13.21□□□□□ -0.29
TPM3-219ENST00000509409 OR7A10O76100 309 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 LCKP06239 509 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 PGA4P0DJD7 388 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 PGA3P0DJD8 388 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 CCL2P13500 99 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 TNFRSF1BP20333 461 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 GZMMP51124 257 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 CDH15P55291 814 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 SLC36A2Q495M3 483 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 DEF8Q6ZN54 512 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 DPPA2Q7Z7J5 298 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 ICA1LQ8NDH6 482 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 OR1J2Q8NGS2 313 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 PFN4Q8NHR9 129 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 C11orf40Q8WZ69 217 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 SGTBQ96EQ0 304 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 ZNF347Q96SE7 839 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 PRSS27Q9BQR3 290 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 PCDHAC1Q9H158 963 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 MEPEQ9NQ76 525 aaPredicted RBP13.21□□□□□ -0.29
TPM3-219ENST00000509409 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
TPM3-219ENST00000509409 BAG5Q9UL15 447 aa13.21□□□□□ -0.29
TPM3-219ENST00000509409 FBP2O00757 339 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
TPM3-219ENST00000509409 CLPTM1O96005 669 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 IFNA14P01570 189 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 MT-ND1P03886 318 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 PCMT1P22061 227 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 ACHEP22303 614 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms