RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SLC18A1P54219 525 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CLINT1Q14677 625 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 HIST2H2BCQ6DN03 193 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 HIST2H2BDQ6DRA6 164 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 GPRIN3Q6ZVF9 776 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 FAM183BPQ6ZVS7 135 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 EIF4E3Q8N5X7 224 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 BMPERQ8N8U9 685 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 WDR31Q8NA23 367 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SP7Q8TDD2 431 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RND1Q92730 232 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SCMH1Q96GD3 660 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF583Q96ND8 569 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TSNAXQ99598 290 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PKMYT1Q99640 499 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 MRPL45Q9BRJ2 306 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM70Q9BUB7 260 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CLK4Q9HAZ1 481 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 GPR35Q9HC97 309 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PTPRSQ13332 1948 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 KIR2DS1A0A191URI9 304 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 FADS2P1A8MWK0 482 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OIP5O43482 229 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 HYAL3O43820 417 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RAB3BP20337 219 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 FGF9P31371 208 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CDKN2BP42772 138 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 EMDP50402 254 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CXADRP78310 365 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 BIKQ13323 160 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 KIR2DS1Q14954 304 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RAB35Q15286 201 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TIGD2Q4W5G0 525 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 BRMS1LQ5PSV4 323 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ARL9Q6T311 187 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PEG10Q86TG7 708 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 COMMD7Q86VX2 200 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PDIK1LQ8N165 341 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SLCO4A1Q96BD0 722 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SFRP2Q96HF1 295 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RNF2Q99496 336 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR11A1Q9GZK7 315 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TKTL2Q9H0I9 626 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ZFP14Q9HCL3 533 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PLEKHJ1Q9NW61 149 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 NPAP1Q9NZP6 1156 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 VWA7Q9Y334 891 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OARD1Q9Y530 152 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 IQCMA0A1B0GVH7 501 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 A0A1W2PR80 420 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 MARCH11A6NNE9 402 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 IQCF5A8MTL0 148 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 H0YL77 283 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 APOC4-APOC2K7ER74 178 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 M0R2Z0 102 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PSPNO60542 156 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 APOC2P02655 101 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SELPP16109 830 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CA4P22748 312 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 KDELR1P24390 212 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DUSP1P28562 367 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 YAP1P46937 504 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CTSCP53634 463 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PTTG1IPP53801 180 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 BTG1P62324 171 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 KCNMB1Q16558 191 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 NKAIN1Q4KMZ8 207 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TCEAL5Q5H9L2 206 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 AGBL4Q5VU57 503 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SHISA2Q6UWI4 295 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 NKAIN4Q8IVV8 208 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF283Q8N7M2 679 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PRELID2Q8N945 189 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR2T33Q8NG76 320 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR5M1Q8NGP8 315 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR14A16Q8NHC5 309 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CASTOR1Q8WTX7 329 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR8D1Q8WZ84 308 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DYRK2Q92630 601 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 MCHR2Q969V1 340 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 FUBP1Q96AE4 644 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RARRES2Q99969 163 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 FOLH1BQ9HBA9 442 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM27Q9HBJ8 222 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 MRPL17Q9NRX2 175 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SLC2A6Q9UGQ3 507 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 GMNCA6NCL1 334 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 LILRA5A6NI73 299 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DBX1A6NMT0 343 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CDRT15L2A8MXV6 281 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 B8ZZF3 427 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DLGAP1O14490 977 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SYT7O43581 403 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CXCL10P02778 98 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR5H8P0DN80 308 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 S100PP25815 95 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SSTR2P30874 369 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ELAVL2Q12926 359 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RBMS2Q15434 407 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms