RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RRM2P31350 389 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SFTPDP35247 375 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC9A3P48764 834 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 STARP49675 285 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SUCLG1P53597 346 aaKnown RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 CLDN20P56880 219 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 H3F3AP84243 136 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 HSF1Q00613 529 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SPIBQ01892 262 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 EGR4Q05215 589 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 PRKCDQ05655 676 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZP4Q12836 540 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 MYBPHQ13203 477 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 CCNIQ14094 377 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 HLXQ14774 488 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 KPNB1Q14974 876 aaKnown RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF74Q16587 644 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ACSF3Q4G176 576 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 C1orf185Q5T7R7 199 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 RIPPLY2Q5TAB7 128 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 B3GNT6Q6ZMB0 384 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF730Q6ZMV8 503 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 TMPRSS11FQ6ZWK6 438 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 MBOAT2Q6ZWT7 520 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 HIST3H2AQ7L7L0 130 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 P4HA3Q7Z4N8 544 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 TSEN54Q7Z6J9 526 aaKnown RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 NKAIN4Q8IVV8 208 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 UBQLNLQ8IYU4 475 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 FAM86B1Q8N7N1 296 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR5M1Q8NGP8 315 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR10D3Q8NH80 312 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 MBD3L2Q8NHZ7 208 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 PIGXQ8TBF5 258 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC7A13Q8TCU3 470 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 DNAJC9Q8WXX5 260 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SMPDL3BQ92485 455 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 STMN2Q93045 179 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 HIST1H2ACQ93077 130 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF566Q969W8 418 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF524Q96C55 264 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SGTBQ96EQ0 304 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 BOD1Q96IK1 185 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ARL5BQ96KC2 179 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 NPAS1Q99742 590 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 KLHDC3Q9BQ90 382 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 TUBA1CQ9BQE3 449 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 PRRG4Q9BZD6 226 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 NDEL1Q9GZM8 345 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 DENND2DQ9H6A0 471 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 COQ10BQ9H8M1 238 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 FANCFQ9NPI8 374 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 NANSQ9NR45 359 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 PNPLA3Q9NST1 481 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 MAN2C1Q9NTJ4 1040 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ALKBH4Q9NXW9 302 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 KLHL9Q9P2J3 617 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF229Q9UJW7 825 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 RASD1Q9Y272 281 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 MEMO1Q9Y316 297 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 LYVE1Q9Y5Y7 322 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 V9GYQ6 96 aa4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 NCOA6Q14686 2063 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P44-201ENST00000508597 SPTAN1Q13813 2472 aaKnown RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 DOPEY1Q5JWR5 2465 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 LRRK2Q5S007 2527 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CACNA1CQ13936 2221 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 IGKV1D-42A0A075B6H8 117 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 IGKV3D-15A0A087WSY6 115 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 A0A087WUU8 490 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TRGV8A0A0C4DH27 118 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SH3PXD2BA1X283 911 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ERICH4A6NGS2 130 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR6C65A6NJZ3 312 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLC22A20A6NK97 555 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 AQP7P3A6NL99 342 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF724A8MTY0 619 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 NPIPB4C9JG80 1138 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FTCDNL1E5RQL4 147 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CXCL13O43927 109 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CYTIPO60759 359 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 WISP2O76076 250 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR7A10O76100 309 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CCNB2O95067 398 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR6A2O95222 327 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 LDLRP01130 860 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 BGLAPP02818 100 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PRB1P04280 392 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ASAH2BP0C7U1 165 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ANXA8P13928 327 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FUT1P19526 365 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CCNA2P20248 432 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 IL11P20809 199 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 GSTM3P21266 225 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TCEA1P23193 301 aaKnown RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CEACAM8P31997 349 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 YAP1P46937 504 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms