RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 C12orf43Q96C57 262 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 DGCR14Q96DF8 476 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SGTBQ96EQ0 304 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZBED6CLQ96FA7 236 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 GRAMD2BQ96HH9 432 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 C12orf42Q96LP6 360 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 C10orf90Q96M02 699 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TNFRSF13CQ96RJ3 184 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CDCA3Q99618 268 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC35A5Q9BS91 424 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TRIM51Q9BSJ1 452 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC25A51Q9H1U9 297 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RHOJQ9H4E5 214 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 KLHL31Q9H511 634 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PLEKHA1Q9HB21 404 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RHOFQ9HBH0 211 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 MYOZ1Q9NP98 299 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ACKR4Q9NPB9 350 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PNRC2Q9NPJ4 139 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 OLFML3Q9NRN5 406 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZFP57Q9NU63 452 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 HRASLS2Q9NWW9 162 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TEX10Q9NXF1 929 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PLEKHB1Q9UF11 243 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TFR2Q9UP52 801 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SNX10Q9Y5X0 201 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CC2D2AQ9P2K1 1620 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PDS5AQ29RF7 1337 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 NUP155O75694 1391 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CPDO75976 1380 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PCF11O94913 1555 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TRBV5-7A0A0A0MS05 114 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC5A10A0PJK1 596 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 LRIT2A6NDA9 550 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 EFCAB9A8MZ26 197 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF487B1APH4 448 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 G3V4G9 280 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 BHLHE40O14503 412 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ACOT8O14734 319 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 BET1O15155 118 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TGOLN2O43493 480 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CDC40O60508 579 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 UGT1A9O60656 530 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CST8O60676 142 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TOM1O60784 492 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MPDU1O75352 247 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ADAP1O75689 374 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ANXA9O76027 345 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 GAS8-AS1O95177 125 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 GJB5O95377 273 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ATP6V1G2O95670 118 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 APOC1P02654 83 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 IFNA16P05015 189 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 IGF1P05019 195 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 RPLP0P05388 317 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZDHHC11BP0C7U3 371 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 SCGB1A1P11684 91 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MYOGP15173 224 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF43P17038 809 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PRKACGP22612 351 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CRABP1P29762 137 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 HNRNPH1P31943 449 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 SSTR5P35346 364 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PPOXP50336 477 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 LBX1P52954 281 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 HNRNPH2P55795 449 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ERVS71-1P61550 626 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 HMGCS1Q01581 520 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 LTBQ06643 244 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MFGE8Q08431 387 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CNTN1Q12860 1018 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 C1orf61Q13536 156 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ITPK1Q13572 414 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 EIF2B1Q14232 305 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TSNQ15631 228 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF77Q15935 545 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PSMD5Q16401 504 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 HLFQ16534 295 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 DUOXA1Q1HG43 343 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 RESP18Q5W5W9 173 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR5M10Q6IEU7 315 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TRIM40Q6P9F5 258 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 DHRS11Q6UWP2 260 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 DRAM2Q6UX65 266 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TMEM179Q6ZVK1 233 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 Q71RC1 249 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 NIPA1Q7RTP0 329 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 NUFIP2Q7Z417 695 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TSEN54Q7Z6J9 526 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 FGFRL1Q8N441 504 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TMEM156Q8N614 296 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR2L5Q8NG80 312 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR2T11Q8NH01 316 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR2V1Q8NHB1 315 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MRGPRDQ8TDS7 321 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 SETD7Q8WTS6 366 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TFGQ92734 400 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TESCQ96BS2 214 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms