RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ZNF544Q6NX49 715 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 CCDC137Q6PK04 289 aaKnown RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 ALKAL1Q6UXT8 129 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 SYT10Q6XYQ8 523 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 CCDC80Q76M96 950 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 TMEM179BQ7Z7N9 219 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 BLIDQ8IZY5 108 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 CLEC4FQ8N1N0 589 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 ZNF564Q8TBZ8 553 aaPredicted RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 SETD7Q8WTS6 366 aaKnown RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 ANKRD49Q8WVL7 239 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 TCTEX1D2Q8WW35 142 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 RAPGEF5Q92565 580 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 FGF11Q92914 225 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 TCEAL3Q969E4 200 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 MARC2Q969Z3 335 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 OTUB2Q96DC9 234 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 MTMR9Q96QG7 549 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 TIPINQ9BVW5 301 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 RAB34Q9BZG1 259 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 ISG20L2Q9H9L3 353 aaKnown RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 SMPD3Q9NY59 655 aaPredicted RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 PIPOXQ9P0Z9 390 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 TBK1Q9UHD2 729 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 PTBP2Q9UKA9 531 aaKnown RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 ABCG2Q9UNQ0 655 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 MEMO1Q9Y316 297 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 AK6Q9Y3D8 172 aaKnown RBP4.25□□□□□ -1.73
HERC4-213ENST00000506515 CABIN1Q9Y6J0 2220 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 PIEZO2Q9H5I5 2752 aa4.25□□□□□ -1.73
HERC4-213ENST00000506515 AKAP13Q12802 2813 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 IGHV1OR15-1A0A075B7D0 117 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 C15orf38-AP3S2A0A0A6YYH1 394 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 ARHGEF35A5YM69 484 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 YKT6O15498 198 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 LYPD3O95274 346 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 SEMG1P04279 462 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 CLTAP09496 248 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 PNMTP11086 282 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 RNH1P13489 461 aaKnown RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 CALRP27797 417 aaKnown RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 FGF9P31371 208 aaPredicted RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 LEPP41159 167 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 CCR2P41597 374 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 RGRP47804 291 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 GBX2P52951 348 aaPredicted RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 ILKQ13418 452 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 CFAP221Q4G0U5 840 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 RSBN1Q5VWQ0 802 aaPredicted RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 RGS9BPQ6ZS82 235 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 LCA5Q86VQ0 697 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 C14orf178Q8N769 122 aaPredicted RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 OR4D9Q8NGE8 314 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 SLC35A5Q9BS91 424 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 CRACR2AQ9BSW2 395 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 SRXN1Q9BYN0 137 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 PRORYQ9H606 182 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 PLSCR3Q9NRY6 295 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 IL17CQ9P0M4 197 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 RASD1Q9Y272 281 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 MYO18AQ92614 2054 aaKnown RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 RAI1Q7Z5J4 1906 aaPredicted RBP4.24□□□□□ -1.73
HERC4-213ENST00000506515 ZNF462Q96JM2 2506 aa4.24□□□□□ -1.73
HERC4-213ENST00000506515 VWA8A3KMH1 1905 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 IGHV7-81A0A0B4J1V7 117 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 TMEM110-MUSTN1A8MSY1 372 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 K7N7A8 449 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 TAPBPO15533 448 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 ZNF264O43296 627 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 SPAG6O75602 509 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 LALBAP00709 142 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 PCMT1P22061 227 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 AQP1P29972 269 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 DAP3P51398 398 aaKnown RBP4.23□□□□□ -1.73
HERC4-213ENST00000506515 ORC2Q13416 577 aaPredicted RBP4.23□□□□□ -1.73
HERC4-213ENST00000506515 ELAVL3Q14576 367 aaKnown RBP4.23□□□□□ -1.73
HERC4-213ENST00000506515 KRT71Q3SY84 523 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 PMF1Q6P1K2 205 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 ARCQ7LC44 396 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 TMEM110Q86TL2 294 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 PPP1R27Q86WC6 154 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 VSTM4Q8IW00 320 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 STEAP2Q8NFT2 490 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 PIGCQ92535 297 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 EMG1Q92979 244 aaKnown RBP4.23□□□□□ -1.73
HERC4-213ENST00000506515 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 XPO6Q96QU8 1125 aaKnown RBP4.23□□□□□ -1.73
HERC4-213ENST00000506515 TUBGCP2Q9BSJ2 902 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 NUP58Q9BVL2 599 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 SMYD3Q9H7B4 428 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 UFSP2Q9NUQ7 469 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 DEC1Q9P2X7 70 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 PHF11Q9UIL8 331 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 ERVW-1Q9UQF0 538 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 KIF25-AS1Q9Y6Z4 181 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 USP9XQ93008 2570 aaPredicted RBP4.23□□□□□ -1.73
HERC4-213ENST00000506515 NID2Q14112 1375 aa4.23□□□□□ -1.73
HERC4-213ENST00000506515 KNL1Q8NG31 2342 aa4.22□□□□□ -1.73
HERC4-213ENST00000506515 AHCTF1Q8WYP5 2266 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms