RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SLC7A6OSQ96CW6 309 aaPredicted RBP14.57□□□□□ -0.08
SNCA-209ENST00000506244 TNFRSF13CQ96RJ3 184 aa14.57□□□□□ -0.08
SNCA-209ENST00000506244 FUZQ9BT04 418 aa14.57□□□□□ -0.08
SNCA-209ENST00000506244 KATNB1Q9BVA0 655 aa14.57□□□□□ -0.08
SNCA-209ENST00000506244 C1QTNF6Q9BXI9 259 aa14.57□□□□□ -0.08
SNCA-209ENST00000506244 MRPL13Q9BYD1 178 aaKnown RBP14.57□□□□□ -0.08
SNCA-209ENST00000506244 CXorf56Q9H5V9 222 aa14.57□□□□□ -0.08
SNCA-209ENST00000506244 CRNNQ9UBG3 495 aaPredicted RBP14.57□□□□□ -0.08
SNCA-209ENST00000506244 UNC119BA6NIH7 251 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 SHISA9B4DS77 424 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 XKRYO14609 159 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 ACOT8O14734 319 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 MGRN1O60291 552 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 UBL3O95164 117 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 IGKV3-15P01624 115 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 CRYAAP02489 173 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 CD14P08571 375 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 QDPRP09417 244 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 FPR3P25089 353 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 ACVR1BP36896 505 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 GK3PQ14409 553 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 IGFN1Q86VF2 1251 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 WDFY1Q8IWB7 410 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 LRRC75AQ8NAA5 344 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 SYT14Q8NB59 555 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 FANK1Q8TC84 345 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 MCHR2Q969V1 340 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 CXXC4Q9H2H0 198 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 TMEM38BQ9NVV0 291 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 GRHPRQ9UBQ7 328 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 SIGLEC7Q9Y286 467 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 LYVE1Q9Y5Y7 322 aa14.56□□□□□ -0.08
SNCA-209ENST00000506244 IGHV1-18A0A0C4DH31 117 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 DHRS12A0PJE2 317 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 TNFRSF11BO00300 401 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 SMPD2O60906 423 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 RAB36O95755 333 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 IGLV1-44P01699 117 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 OR8G3PP0DMU2 310 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 CBR1P16152 277 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 ZNF133P52736 654 aaPredicted RBP14.55□□□□□ -0.08
SNCA-209ENST00000506244 TUBA1BP68363 451 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 TUBA4AP68366 448 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 RUNX1T1Q06455 604 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 FHL1Q13642 323 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 GSG1Q2KHT4 349 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 C10orf128Q5T292 105 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 GPR139Q6DWJ6 353 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 PGM2L1Q6PCE3 622 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 LRFN4Q6PJG9 635 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 TUBA1AQ71U36 451 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 ARIH2OSQ8N7S6 290 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 ZNF519Q8TB69 540 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 ZNF570Q96NI8 536 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 TSPAN32Q96QS1 320 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 RBP7Q96R05 134 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 GPX7Q96SL4 187 aaPredicted RBP14.55□□□□□ -0.08
SNCA-209ENST00000506244 KCNK17Q96T54 332 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 YY1AP1Q9H869 796 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 REEP1Q9H902 201 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 CISD1Q9NZ45 108 aaKnown RBP14.55□□□□□ -0.08
SNCA-209ENST00000506244 ALPK2Q86TB3 2170 aa14.55□□□□□ -0.08
SNCA-209ENST00000506244 ROS1P08922 2347 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 AHCYL1O43865 530 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 CD79AP11912 226 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 RPS6KA3P51812 740 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 SPOCK1Q08629 439 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 TESK1Q15569 626 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 THEM4Q5T1C6 240 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 OR2T5Q6IEZ7 315 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 SMARCD3Q6STE5 483 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 SPNS3Q6ZMD2 512 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 ADCK1Q86TW2 530 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 MDP1Q86V88 176 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 LRRC75A-AS1Q8N1F1 130 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 SLC22A24Q8N4F4 322 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 IL17RDQ8NFM7 739 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 OR2T29Q8NH02 315 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 LILRB1Q8NHL6 650 aaPredicted RBP14.54□□□□□ -0.08
SNCA-209ENST00000506244 SMAP2Q8WU79 429 aaPredicted RBP14.54□□□□□ -0.08
SNCA-209ENST00000506244 HDAC2Q92769 488 aaKnown RBP14.54□□□□□ -0.08
SNCA-209ENST00000506244 MMADHCQ9H3L0 296 aaPredicted RBP14.54□□□□□ -0.08
SNCA-209ENST00000506244 ZNF346Q9UL40 294 aaKnown RBP14.54□□□□□ -0.08
SNCA-209ENST00000506244 CADP27708 2225 aa14.54□□□□□ -0.08
SNCA-209ENST00000506244 DSCAMO60469 2012 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 AKAP9Q99996 3911 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 CCNB2O95067 398 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 HLA-HP01893 362 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 CECR9P0C854 216 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 NPR2P20594 1047 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 SDHAP31040 664 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 SLC6A6P31641 620 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 GUCA1AP43080 201 aaPredicted RBP14.53□□□□□ -0.08
SNCA-209ENST00000506244 IDH3GP51553 393 aaPredicted RBP14.53□□□□□ -0.08
SNCA-209ENST00000506244 HMGA2P52926 109 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 ERVK-25P63136 954 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 MYBPC1Q00872 1141 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 NAAAQ02083 359 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 NPRL3Q12980 569 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 KRR1Q13601 381 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms