RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 FAM86B1Q8N7N1 296 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 CEP112Q8N8E3 955 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 HSD17B11Q8NBQ5 300 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 STMN2Q93045 179 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 SH3GL1Q99961 368 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 KCTD14Q9BQ13 255 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 NT5MQ9NPB1 228 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 SUN2Q9UH99 717 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 CD84Q9UIB8 345 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 MROH7-TTC4A0A0A0MT08 1334 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 FAM240BA0A1B0GVZ2 78 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 HIDE1A8MVS5 230 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 GOSR2O14653 212 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 PSTPIP1O43586 416 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 EIF3GO75821 320 aaKnown RBP eCLIP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 TMEM50AO95807 157 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 PRPS2P11908 318 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 KITLGP21583 273 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 AK4P27144 223 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 RFX3P48380 749 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF92Q03936 586 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 MAJINQ3KP22 176 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 CTSL3PQ5NE16 218 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 VAX1Q5SQQ9 334 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 FAM71E1Q6IPT2 247 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 SLC25A48Q6ZT89 311 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 H1FOOQ8IZA3 346 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 STPG2Q8N412 459 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 OR2L3Q8NG85 312 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 TMEM54Q969K7 222 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 TSNARE1Q96NA8 513 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 WFIKKN1Q96NZ8 548 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 SH3GL3Q99963 347 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 GCOM2Q9BZD3 368 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 NOX3Q9HBY0 568 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 EXTL2Q9UBQ6 330 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 MN1Q10571 1320 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 CENPJQ9HC77 1338 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 SLIT3O75094 1523 aa2.37□□□□□ -2.03
TOPBP1-204ENST00000505804 IGLV4-60A0A075B6I1 120 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 LRCOL1A6NCL2 159 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 H0YHG0 523 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 CT62P0C5K7 136 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 CASP14P31944 242 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 TAGLN2P37802 199 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 PON3Q15166 354 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 KDELC1Q6UW63 502 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 Q6ZR03 302 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF493Q6ZR52 646 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 NCCRP1Q6ZVX7 275 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 RUFY3Q7L099 469 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 ASCL5Q7RTU5 278 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 NBPF5PQ86XG9 351 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 NT5C3BQ969T7 300 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 TCHPQ9BT92 498 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 RPF2Q9H7B2 306 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF282Q9UDV7 671 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 OR12D3Q9UGF7 316 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 IKZF2Q9UKS7 526 aa2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 MRPS18BQ9Y676 258 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-204ENST00000505804 INS-IGF2F8WCM5 200 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 PPP1R2P9O14990 202 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 SOX15O60248 233 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 UTS2O95399 124 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 CTDNEP1O95476 244 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 C6orf47O95873 294 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 SERPINA3P01011 423 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 FGGP02679 453 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 GNAO1P09471 354 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 PGAM1P18669 254 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 PTMSP20962 102 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 IFNA8P32881 189 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 SERPINB5P36952 375 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 CYB561P49447 251 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 GPX6P59796 221 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 ACTA2P62736 377 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 RPL23AP62750 156 aaKnown RBP2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 KCNJ2P63252 427 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 ACTC1P68032 377 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 PRPSAP1Q14558 356 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 POU2AF1Q16633 256 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 HES5Q5TA89 166 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 FAM92BQ6ZTR7 304 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 TMEM179Q6ZVK1 233 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 ABHD12BQ7Z5M8 362 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 TMEM135Q86UB9 458 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 EGFL6Q8IUX8 553 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 PGAM4Q8N0Y7 254 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 OR2L8Q8NGY9 312 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 OR5W2Q8NH69 310 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 UBALD1Q8TB05 177 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 TUBGCP3Q96CW5 907 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 LINC00597Q9H2U6 94 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 KLHL28Q9NXS3 571 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 ASB3Q9Y575 518 aa2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 KIF26AQ9ULI4 1882 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-204ENST00000505804 TRAV39A0A0B4J263 110 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 A0A0B4J2A0 478 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 IGHV5-51A0A0C4DH38 117 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms