RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ZNF74Q16587 644 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 C2orf76Q3KRA6 126 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 MESTQ5EB52 335 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CBLN3Q6UW01 205 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 TMEM205Q6UW68 189 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 MRPL48Q96GC5 212 aaKnown RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 BMFQ96LC9 184 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 FOXN4Q96NZ1 517 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 GAS2L1Q99501 681 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 ELF4Q99607 663 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 POFUT1Q9H488 388 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-206ENST00000505226 CLDN16Q9Y5I7 305 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 HRH3Q9Y5N1 445 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 F5P12259 2224 aa10.78□□□□□ -0.68
UBE3D-206ENST00000505226 FAM74A7A6NL05 159 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 TMEM127O75204 238 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 CD14P08571 375 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 ALOX5APP20292 161 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 KIR2DL1P43626 348 aaPredicted RBP10.77□□□□□ -0.68
UBE3D-206ENST00000505226 SLC25A1P53007 311 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 PRPS1P60891 318 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 NR0B2Q15466 257 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 CD226Q15762 336 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 C4orf46Q504U0 113 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 TMEM31Q5JXX7 168 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 RNF44Q7L0R7 432 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 FAM220AQ7Z4H9 259 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 JAZF1Q86VZ6 243 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF676Q8N7Q3 588 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 BCORP1Q8N888 145 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 SLC38A3Q99624 504 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 LPAR4Q99677 370 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 GAL3ST1Q99999 423 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 HIF3AQ9Y2N7 669 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 SLC6A5Q9Y345 797 aa10.77□□□□□ -0.68
UBE3D-206ENST00000505226 EFCAB7A8K855 629 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 WISP1O95388 367 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 CSF1P09603 554 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 RPA2P15927 270 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 MAPK3P27361 379 aaPredicted RBP10.77□□□□□ -0.69
UBE3D-206ENST00000505226 BTG2P78543 158 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 WDR38Q5JTN6 314 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 LRRN1Q6UXK5 716 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF227Q86WZ6 799 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 C10orf53Q8N6V4 93 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 ZSCAN1Q8NBB4 408 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 OR6N2Q8NGY6 317 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 FAM131CQ96AQ9 280 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 TSPAN32Q96QS1 320 aa10.77□□□□□ -0.69
UBE3D-206ENST00000505226 RPP25Q9BUL9 199 aaKnown RBP10.77□□□□□ -0.69
UBE3D-206ENST00000505226 ITGB2P05107 769 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 COL9A1P20849 921 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 IL32P24001 234 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 SDHAP31040 664 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 RAB38P57729 211 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 GRM7Q14831 915 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ZNHIT3Q15649 155 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ALG10Q5BKT4 473 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 FRMD1Q8N878 549 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 KTI12Q96EK9 354 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 EXO5Q9H790 373 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ZC4H2Q9NQZ6 224 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 KCNG2Q9UJ96 466 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 LAMP5Q9UJQ1 280 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 FBXO4Q9UKT5 387 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ARID1BQ8NFD5 2236 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 C17orf51A8MQB3 221 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 M0QYG6 137 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 AQP8O94778 261 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 WNT11O96014 354 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 AKAIN1P0CW23 69 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 FAUP35544 74 aaKnown RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 FNTBP49356 437 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM196Q5HYL7 178 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 C11orf88Q6PI97 169 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 GALNT16Q8N428 558 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 C16orf52Q8NHV5 167 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 RSC1A1Q92681 617 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 C1orf198Q9H425 327 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 MMP25Q9NPA2 562 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 IFT46Q9NQC8 304 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 MRTO4Q9UKD2 239 aaKnown RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 SLC22A13Q9Y226 551 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 A0A0A6YYC8 382 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 RFPL4AA6NLU0 287 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 RFPL4AL1F8VTS6 287 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 I3L1I5 382 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 PNPP00491 289 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 PLATP00750 562 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ASAH2BP0C7U1 165 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 RPL18Q07020 188 aaKnown RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 RIPPLY1Q0D2K3 151 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 STEAP1BQ6NZ63 245 aa10.76□□□□□ -0.69
UBE3D-206ENST00000505226 ATG4DQ86TL0 474 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-206ENST00000505226 PLPP7Q8NBV4 271 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms