RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TFPIP10646 304 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 PAX1P15863 534 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 OTX1P32242 354 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 PER3P56645 1201 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 FAM27BQ5VT28 67 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ADAM5Q6NVV9 412 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ANKRD16Q6P6B7 361 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 C22orf34Q6ZV56 151 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 UBQLNLQ8IYU4 475 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 CBR4Q8N4T8 237 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC26A10Q8NG04 563 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SSC4DQ8WTU2 575 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 EXOGQ9Y2C4 368 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ADAM18Q9Y3Q7 739 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 POLEQ07864 2286 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 A0A1W2PRG6 482 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 KPNA4O00629 521 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 AKAP8O43823 692 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF14P17017 642 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 IGFBP5P24593 272 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 MEX3DQ86XN8 651 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 PLCXD1Q9NUJ7 323 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 MRPL22Q9NWU5 206 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 GALNT8Q9NY28 637 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 NOSIPQ9Y314 301 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 PRRC2CQ9Y520 2896 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 DCTN6O00399 190 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SIAH2O43255 324 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 IGHG1P01857 330 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 CST2P09228 141 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 COX5BP10606 129 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF43P17038 809 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SMSP52788 366 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 POU3F1Q03052 451 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 TIMM23BQ5SRD1 257 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC27A4Q6P1M0 643 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 TIGD4Q8IY51 512 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 TMEM163Q8TC26 289 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ANKRD60Q9BZ19 345 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 NDEL1Q9GZM8 345 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 TAS2R16Q9NYV7 291 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 PROCRQ9UNN8 238 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 U3KQV3 271 aa7.26□□□□□ -1.25
CDC42SE2-208ENST00000505065 ANKRD65E5RJM6 399 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 C19orf84I3L1E1 186 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 IGLV3-1P01715 115 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 ADORA3P0DMS8 318 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 FOXG1P55316 489 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 BIDP55957 195 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 CLDN17P56750 224 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 CTXN1P60606 82 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 ITGADQ13349 1161 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 KRR1Q13601 381 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR6V1Q8N148 313 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 RHOXF1Q8NHV9 184 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 APH1AQ96BI3 265 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 Q96M85 177 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF570Q96NI8 536 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 OPN3Q9H1Y3 402 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 TOR3AQ9H497 397 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 DDX28Q9NUL7 540 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 MED29Q9NX70 200 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 MOKQ9UQ07 419 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 GCN1Q92616 2671 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 WBP4O75554 376 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 CCNA2P20248 432 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 PPP1R8Q12972 351 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 NIPAL3Q6P499 406 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 ABHD12BQ7Z5M8 362 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF584Q8IVC4 421 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 SEMA6AQ9H2E6 1030 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 B9D1Q9UPM9 204 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 PDZD2O15018 2839 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 HIVEP3Q5T1R4 2406 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 TRGV8A0A0C4DH27 118 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 RNF13O43567 381 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 DENRO43583 198 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 PPP1R3DO95685 299 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 F13BP05160 661 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 NPR2P20594 1047 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 CRYGSP22914 178 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 NXNL2Q5VZ03 156 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 AAED1Q7RTV5 226 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF485Q8NCK3 441 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC25A36Q96CQ1 311 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 RASD2Q96D21 266 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 C14orf79Q96F83 325 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 HCAR1Q9BXC0 346 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 KRT84Q9NSB2 600 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 SMPD3Q9NY59 655 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 CACNA1CQ13936 2221 aa7.25□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR6C6A6NF89 314 aa7.24□□□□□ -1.25
CDC42SE2-208ENST00000505065 DVL2O14641 736 aa7.24□□□□□ -1.25
CDC42SE2-208ENST00000505065 PRKYO43930 277 aa7.24□□□□□ -1.25
CDC42SE2-208ENST00000505065 NR2C1P13056 603 aa7.24□□□□□ -1.25
CDC42SE2-208ENST00000505065 MYF6P23409 242 aa7.24□□□□□ -1.25
CDC42SE2-208ENST00000505065 LGALS3BPQ08380 585 aa7.24□□□□□ -1.25
CDC42SE2-208ENST00000505065 TMEM225Q6GV28 225 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms