RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 ASCL5Q7RTU5 278 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 SLC22A9Q8IVM8 553 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 MS4A15Q8N5U1 240 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 PLPPR1Q8TBJ4 325 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 GEMIN6Q8WXD5 167 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 SMIM10Q96HG1 83 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 OSBPL10Q9BXB5 764 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 TM9SF3Q9HD45 589 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 ETNK2Q9NVF9 386 aa3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 CSDC2Q9Y534 153 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-206ENST00000504751 CEMIPQ8WUJ3 1361 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 XKRY2A2RUG3 117 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 PRSS37A4D1T9 235 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 ANKRD63C9JTQ0 380 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 XKRYO14609 159 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 IFNA8P32881 189 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 ATP5OP48047 213 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 RFX3P48380 749 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 RORCP51449 518 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 SUCLG1P53597 346 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 HMGCS1Q01581 520 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 CUL2Q13617 745 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 GGTLC2Q14390 218 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 TGFBIQ15582 683 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 TFDP3Q5H9I0 405 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 RNASEKQ6P5S7 137 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 ZYG11AQ6WRX3 759 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 Q6ZSR3 168 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 H2AFVQ71UI9 128 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 TMEM135Q86UB9 458 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 FAM228AQ86W67 206 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 OR52K2Q8NGK3 314 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 AKR7LQ8NHP1 331 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 KCNG3Q8TAE7 436 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 CEP170P1Q96L14 293 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 TCHPQ9BT92 498 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 INPP5EQ9NRR6 644 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 DDX18Q9NVP1 670 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 PSMC3IPQ9P2W1 217 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 TBX21Q9UL17 535 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 NFASCO94856 1347 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
TRAPPC13-206ENST00000504751 NSD2O96028 1365 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 MTCL1Q9Y4B5 1905 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 IGLV4-69A0A075B6H9 119 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 IGLV11-55A0A075B6I3 123 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 FAM25EA8MYX2 175 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 SGK1O00141 431 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 C6orf47O95873 294 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 FOLR1P15328 257 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 GDI1P31150 447 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 ATP5IP56385 69 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 HERVK_113P61574 105 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 MRPS22P82650 360 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 ENPEPQ07075 957 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 EIF4EBP2Q13542 120 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 TMEM107Q6UX40 140 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 ZFP2Q6ZN57 461 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 NIPA1Q7RTP0 329 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 PEX26Q7Z412 305 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 NANOGNBQ7Z5D8 188 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 LINC01551Q86U37 167 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 CDH26Q8IXH8 852 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 STPG2Q8N412 459 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 ZNF596Q8TC21 504 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 SLC2A14Q8TDB8 520 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 STMN2Q93045 179 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 TPD52L3Q96J77 140 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 WFIKKN1Q96NZ8 548 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 TSSK3Q96PN8 268 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 SH3GL3Q99963 347 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 PLA2G2FQ9BZM2 168 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 PKIBQ9C010 78 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 TPK1Q9H3S4 243 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 SLC2A8Q9NY64 477 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 STARD10Q9Y365 291 aa3.38□□□□□ -1.87
TRAPPC13-206ENST00000504751 SCN2AQ99250 2005 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 A0A0B4J2A0 478 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 FGGP02679 453 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 MAGP20916 626 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 OMGP23515 440 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 SLC7A9P82251 487 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 TMED1Q13445 227 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 CAVIN4Q5BKX8 364 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 OR52W1Q6IF63 320 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 HSD17B11Q8NBQ5 300 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 B3GNT7Q8NFL0 401 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 OR1S2Q8NGQ3 325 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 PIBF1Q8WXW3 757 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 CWH43Q9H720 699 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 LHX9Q9NQ69 397 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 NMRK1Q9NWW6 199 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 SHPKQ9UHJ6 478 aa3.37□□□□□ -1.87
TRAPPC13-206ENST00000504751 TRAV39A0A0B4J263 110 aa3.36□□□□□ -1.87
TRAPPC13-206ENST00000504751 ZNF716A6NP11 495 aa3.36□□□□□ -1.87
TRAPPC13-206ENST00000504751 HIDE1A8MVS5 230 aa3.36□□□□□ -1.87
TRAPPC13-206ENST00000504751 RSPH10B2B2RC85 870 aa3.36□□□□□ -1.87
TRAPPC13-206ENST00000504751 RSPH10BP0C881 870 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms