RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 AMBNQ9NP70 447 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 NYAP2Q9P242 653 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 NME7Q9Y5B8 376 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TRBV5-3A0A0A0MS03 114 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 MED19A0JLT2 244 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 KIAA0513O60268 411 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 GZMHP20718 246 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CAV2P51636 162 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ILF3Q12906 894 aaKnown RBP eCLIP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 KRR1Q13601 381 aaKnown RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF793Q6ZN11 406 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SPATA31D1Q6ZQQ2 1576 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 BBC3Q96PG8 261 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM208Q9BTX3 173 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM45AQ9NWC5 275 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SCML2Q9UQR0 700 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 NACADO15069 1562 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 NEDD4P46934 1319 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 DCTN6O00399 190 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CXCR6O00574 342 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ADAM10O14672 748 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CTSVO60911 334 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CYB5R3P00387 301 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF35P13682 527 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SLC35B1P78383 322 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CCL7P80098 99 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SSBP2P81877 361 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 PDIA2Q13087 525 aaKnown RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SRSF6Q13247 344 aaKnown RBP4.49□□□□□ -1.69
NIPBL-204ENST00000504430 MESDQ14696 234 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 PSG5Q15238 335 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CHRFAM7AQ494W8 412 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SLC9C1Q4G0N8 1177 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 OR2G6Q5TZ20 316 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 PWWP2BQ6NUJ5 590 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 EPGNQ6UW88 154 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 C12orf54Q6X4T0 127 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 ZFP41Q8N8Y5 198 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM174Q8WUU8 243 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 KCTD4Q8WVF5 259 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 IFT81Q8WYA0 676 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 MAFIPQ8WZ33 124 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 OXGR1Q96P68 337 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 OVOL2Q9BRP0 275 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 CWH43Q9H720 699 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 SEC61A2Q9H9S3 476 aa4.49□□□□□ -1.69
NIPBL-204ENST00000504430 MTUS2Q5JR59 1369 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 IGLV3-22A0A075B6J6 115 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SYCE1LA8MT33 242 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 HIDE1A8MVS5 230 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SEMA7AO75326 666 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 CRYZL1O95825 349 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 IGSF6O95976 241 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ATP1B1P05026 303 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 CRABP1P29762 137 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 LEPP41159 167 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 MAGOHP61326 146 aaKnown RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 FCHO2Q0JRZ9 810 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 DUSP6Q16828 381 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SPIN3Q5JUX0 258 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 BRMS1LQ5PSV4 323 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 LINGO4Q6UY18 593 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 Q6ZT83 130 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ACOT7LQ6ZUV0 252 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM144Q7Z5S9 345 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 PDIK1LQ8N165 341 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 PRSS35Q8N3Z0 413 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ATPAF2Q8N5M1 289 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 RDH11Q8TC12 318 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 MYEOVQ96EZ4 313 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 MS4A4EQ96PG1 132 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 KIR2DS5A0A0G2JLQ3 304 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 A0A1B0GV90 55 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 GOLGA6L9A6NEM1 432 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 KIR2DS3K7RE56 304 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 GNRHRP30968 328 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 HOXD3P31249 432 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SLC39A6Q13433 755 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 MED27Q6P2C8 311 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF530Q6P9A1 599 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF730Q6ZMV8 503 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SLC25A48Q6ZT89 311 aaKnown RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 MYPOPQ86VE0 399 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 OR10W1Q8NGF6 305 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 POM121L2Q96KW2 1035 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF385AQ96PM9 386 aaKnown RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 EXOSC1Q9Y3B2 195 aaKnown RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TESMINQ9Y4I5 508 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 A0A087X1B8 175 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 DFFAO00273 331 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 LAD1O00515 517 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TM9SF1O15321 606 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 BIRC5O15392 142 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 PPIHO43447 177 aaKnown RBP4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TRAPPC6AO75865 159 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 TIMP1P01033 207 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 IGHG3P01860 377 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 SERPINA5P05154 406 aa4.48□□□□□ -1.69
NIPBL-204ENST00000504430 NBEAP1P0C6P0 100 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms