RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GPR50Q13585 617 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 TBR1Q16650 682 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ARMCX4Q5H9R4 360 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 CREB3L2Q70SY1 520 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ANKRD13BQ86YJ7 626 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 CLVS1Q8IUQ0 354 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC35F2Q8IXU6 374 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 UBQLNLQ8IYU4 475 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SYS1Q8N2H4 156 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 KDM8Q8N371 416 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF454Q8N9F8 522 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 OR10H4Q8NGA5 316 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 OR4F15Q8NGB8 312 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ASB17Q8WXJ9 295 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 TMEM45BQ96B21 275 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ZMYND19Q96E35 227 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 INTS14Q96SY0 518 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ARHGAP9Q9BRR9 750 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ALG8Q9BVK2 526 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 MRPL13Q9BYD1 178 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 SRXN1Q9BYN0 137 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 NUAK2Q9H093 628 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 RBM38Q9H0Z9 239 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 WDR76Q9H967 626 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 B3GAT2Q9NPZ5 323 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 TRIM36Q9NQ86 728 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 PARPBPQ9NWS1 579 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 MED29Q9NX70 200 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 KCNG2Q9UJ96 466 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 LSM2Q9Y333 95 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF175Q9Y473 711 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 CEPT1Q9Y6K0 416 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 ACACAQ13085 2346 aa7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 URB1O60287 2271 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-202ENST00000503338 WDFY3Q8IZQ1 3526 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 IGKV3D-15A0A087WSY6 115 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 IGLV1-36A0A0B4J1U3 117 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 A0A1W2PQL4 384 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF724A8MTY0 619 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 H7C1C5 153 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC43A1O75387 559 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 HLA-DQA2P01906 255 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 CELA3AP09093 270 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 TACSTD2P09758 323 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 LIMS3P0CW19 117 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 LIMS4P0CW20 117 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 HSMCR30P0CW71 290 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PGA4P0DJD7 388 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PGA3P0DJD8 388 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF823P16415 610 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 CD53P19397 219 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PSMA1P25786 263 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PYCR1P32322 319 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 CSNK1A1P48729 337 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 RGS6P49758 472 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF133P52736 654 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 CLDN17P56750 224 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 LCN6P62502 163 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 EGR3Q06889 387 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 STK11Q15831 433 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 HIST3H3Q16695 136 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 KRTCAP3Q53RY4 240 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 TEX30Q5JUR7 227 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 GPR107Q5VW38 600 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF322Q6U7Q0 402 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 GDPGP1Q6ZNW5 385 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PLEKHG7Q6ZR37 379 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 LHFPL3Q86UP9 236 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 P2RY8Q86VZ1 359 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ERI1Q8IV48 349 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 GLB1L2Q8IW92 636 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 MCEMP1Q8IX19 187 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 TIGD4Q8IY51 512 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 OR6N1Q8NGY5 312 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ZPLD1Q8TCW7 415 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 RNF128Q8TEB7 428 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 SNX33Q8WV41 574 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 UFD1Q92890 307 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 TMIGD2Q96BF3 282 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 YIPF6Q96EC8 236 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 TXNDC15Q96J42 360 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 UCN2Q96RP3 112 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 DOK1Q99704 481 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 TIMP4Q99727 224 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 COQ7Q99807 217 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PRRG4Q9BZD6 226 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PRDM14Q9GZV8 571 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 DEFB127Q9H1M4 99 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 PLSCR2Q9NRY7 297 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 GLRX2Q9NS18 164 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 BABAM2Q9NXR7 383 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 GLTPQ9NZD2 209 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 ENPP5Q9UJA9 477 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 LAMP5Q9UJQ1 280 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 CSAG2Q9Y5P2 127 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 FLVCR1Q9Y5Y0 555 aa7.24□□□□□ -1.25
TOPBP1-202ENST00000503338 APC2O95996 2303 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 SPTBN2O15020 2390 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 ARPC4-TTLL3A0A0A6YYG9 625 aa7.23□□□□□ -1.25
TOPBP1-202ENST00000503338 IGHV3-15A0A0B4J1V0 119 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms