RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RAB1BQ9H0U4 201 aa14□□□□□ -0.17
SCLT1-204ENST00000503215 TMEM38BQ9NVV0 291 aa14□□□□□ -0.17
SCLT1-204ENST00000503215 ARMCX1Q9P291 453 aa14□□□□□ -0.17
SCLT1-204ENST00000503215 MYEF2Q9P2K5 600 aaKnown RBP14□□□□□ -0.17
SCLT1-204ENST00000503215 CMAHPQ9Y471 501 aa14□□□□□ -0.17
SCLT1-204ENST00000503215 MXRA5Q9NR99 2828 aa14□□□□□ -0.17
SCLT1-204ENST00000503215 NDUFS8O00217 210 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 DHHO43323 396 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 LMX1BO60663 402 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 BCL10O95999 233 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 VIMP08670 466 aaKnown RBP13.99□□□□□ -0.17
SCLT1-204ENST00000503215 CCL2P13500 99 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 TCN1P20061 433 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-204ENST00000503215 IGFBP5P24593 272 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 IL2RGP31785 369 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 SEC24CP53992 1094 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 TAS2R41P59536 307 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 GUCY1A3Q02108 690 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 CYBRD1Q53TN4 286 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 COQ5Q5HYK3 327 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 IL17RELQ6ZVW7 336 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 PIWIL3Q7Z3Z3 882 aaKnown RBP13.99□□□□□ -0.17
SCLT1-204ENST00000503215 NANOGNBQ7Z5D8 188 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 MEX3DQ86XN8 651 aaKnown RBP13.99□□□□□ -0.17
SCLT1-204ENST00000503215 SLC22A24Q8N4F4 322 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 POU5F2Q8N7G0 328 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 SYT14Q8NB59 555 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 MRPL24Q96A35 216 aaKnown RBP13.99□□□□□ -0.17
SCLT1-204ENST00000503215 SH3GL1Q99961 368 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 SYT3Q9BQG1 590 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 DYNLRB1Q9NP97 96 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 STAB1Q9NY15 2570 aa13.99□□□□□ -0.17
SCLT1-204ENST00000503215 LOC100289279A0A1B0GTE1 492 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 VSTM5A8MXK1 200 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 PIP5K1CO60331 668 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 OR7A10O76100 309 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 RAB36O95755 333 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 MT-ND1P03886 318 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 APEHP13798 732 aaKnown RBP13.98□□□□□ -0.17
SCLT1-204ENST00000503215 ALDH3B1P43353 468 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 LAPTM4AQ15012 233 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 MAD2L1BPQ15013 274 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-204ENST00000503215 FXNQ16595 210 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 OR4K5Q8NGD3 323 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 RASSF5Q8WWW0 418 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 MCHR2Q969V1 340 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 SGTBQ96EQ0 304 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 BEX2Q9BXY8 128 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 MRPL13Q9BYD1 178 aaKnown RBP13.98□□□□□ -0.17
SCLT1-204ENST00000503215 CHODLQ9H9P2 273 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 CMTM6Q9NX76 183 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 BAG5Q9UL15 447 aa13.98□□□□□ -0.17
SCLT1-204ENST00000503215 LILRA1O75019 489 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 TRMUO75648 421 aaKnown RBP13.97□□□□□ -0.17
SCLT1-204ENST00000503215 UBL3O95164 117 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 OR5F1O95221 314 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 SERPINA5P05154 406 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 FAM157CP0CG43 387 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 OR8G3PP0DMU2 310 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 ZNF23P17027 643 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 GIFP27352 417 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 KDELR2P33947 212 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 GLRXP35754 106 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 GZMKP49863 264 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 TRIP10Q15642 601 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 HIST3H3Q16695 136 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 LRRC23Q53EV4 343 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-204ENST00000503215 PODNL1Q6PEZ8 512 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 ZNF786Q8N393 782 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 UBASH3BQ8TF42 649 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 TMEM239Q8WW34 195 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 NEU4Q8WWR8 484 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-204ENST00000503215 ASB10Q8WXI3 467 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 RCN3Q96D15 328 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 TPD52L3Q96J77 140 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 MYOZ1Q9NP98 299 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-204ENST00000503215 REV1Q9UBZ9 1251 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 CDC42EP3Q9UKI2 254 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 SNX13Q9Y5W8 968 aa13.97□□□□□ -0.17
SCLT1-204ENST00000503215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.97□□□□□ -0.172e-8■■■■□ 24.1
SCLT1-204ENST00000503215 IGKV1D-43A0A0B4J1Z2 117 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 RNF212BA8MTL3 300 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 BBIP1A8MTZ0 92 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 NPPAP01160 153 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 IGHG1P01857 330 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 YAP1P46937 504 aaKnown RBP13.96□□□□□ -0.17
SCLT1-204ENST00000503215 CLRN1P58418 232 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 SRSF2Q01130 221 aaKnown RBP13.96□□□□□ -0.17
SCLT1-204ENST00000503215 ARMC4Q5T2S8 1044 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 GKAP1Q5VSY0 366 aaPredicted RBP13.96□□□□□ -0.17
SCLT1-204ENST00000503215 ERICH5Q6P6B1 374 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 MICU2Q8IYU8 434 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 SEPHS2Q99611 448 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 OR51B6Q9H340 312 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 INIPQ9NRY2 104 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 TMEM160Q9NX00 188 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 A4GNTQ9UNA3 340 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 CAPN7Q9Y6W3 813 aa13.96□□□□□ -0.17
SCLT1-204ENST00000503215 SYNGR3O43761 229 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms