RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ZBTB37Q5TC79 503 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 OGFOD3Q6PK18 319 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 SEZ6L2Q6UXD5 910 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 LRRN1Q6UXK5 716 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 SLC35D2Q76EJ3 337 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 GLB1L2Q8IW92 636 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 OR8H1Q8NGG4 311 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 OTOSQ8NHW6 89 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 OMA1Q96E52 524 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 C4orf45Q96LM5 186 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 MRI1Q9BV20 369 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 WWTR1Q9GZV5 400 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF576Q9H609 170 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 HEXA-AS1Q9H8Q6 139 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 EXPH5Q8NEV8 1989 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 A0A1B0GVI7 797 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 A0A1W2PQD3 144 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 SULT1B1O43704 296 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 CDC40O60508 579 aaKnown RBP eCLIP8.9□□□□□ -0.98
CLIP1-204ENST00000501271 FOLR1P15328 257 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 POU3F3P20264 500 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-204ENST00000501271 FBLP22087 321 aaKnown RBP8.9□□□□□ -0.98
CLIP1-204ENST00000501271 ABCD3P28288 659 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 FOXL2P58012 376 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 AP3S2P59780 193 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 DCAF7P61962 342 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 ACKR1Q16570 336 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 LINC00303Q3SY05 128 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 C1orf189Q5VU69 101 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 HLA-DQA1Q5Y7H0 255 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 OLFML2AQ68BL7 652 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-204ENST00000501271 EID2Q8N6I1 236 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 GPR148Q8TDV2 347 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 METTL21AQ8WXB1 218 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 MVB12AQ96EY5 273 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 MNTQ99583 582 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 TBL1XR1Q9BZK7 514 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 TAS2R10Q9NYW0 307 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 PTTG3PQ9NZH4 202 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 ELF5Q9UKW6 265 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-204ENST00000501271 CA14Q9ULX7 337 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 NPTNQ9Y639 398 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM14AQ9Y6G1 99 aa8.9□□□□□ -0.98
CLIP1-204ENST00000501271 IGHV1OR21-1A0A087WYE8 117 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 NAP1L6A6NFF2 107 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 XKRYO14609 159 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 TO15178 435 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 SUSD5O60279 629 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 SLC25A12O75746 678 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 TGM6O95932 706 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 WNT11O96014 354 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 HLA-DQA2P01906 255 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 TPOP07202 933 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 SRFP11831 508 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 DNASE1P24855 282 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 CSF2RBP32927 897 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 MNDAP41218 407 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 EPHA4P54764 986 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 NXPH1P58417 271 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 HNRNPKP61978 463 aaKnown RBP eCLIP8.9□□□□□ -0.99
CLIP1-204ENST00000501271 INSM1Q01101 510 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-204ENST00000501271 SGCBQ16585 318 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 MEP1BQ16820 701 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 TEX261Q6UWH6 196 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 LANCL3Q6ZV70 420 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 MAMDC2Q7Z304 686 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-204ENST00000501271 SIX5Q8N196 739 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF519Q8TB69 540 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 MCHR2Q969V1 340 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 DCBLD2Q96PD2 775 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 OR8B4Q96RC9 309 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 SEC22CQ9BRL7 303 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF436Q9C0F3 470 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-204ENST00000501271 VN1R1Q9GZP7 353 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 METTL17Q9H7H0 456 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-204ENST00000501271 ELOVL3Q9HB03 270 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 MRPL22Q9NWU5 206 aaKnown RBP8.9□□□□□ -0.99
CLIP1-204ENST00000501271 B9D1Q9UPM9 204 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 U3KQ87 197 aa8.9□□□□□ -0.99
CLIP1-204ENST00000501271 KIF26BQ2KJY2 2108 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ARID1BQ8NFD5 2236 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 TMED7-TICAM2A0A0A6YYA0 188 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 A0A1B0GUH1 482 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PRSS37A4D1T9 235 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ACOT7O00154 380 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 EIF4E2O60573 245 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 RAD1O60671 282 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 NPIPB7O75200 414 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF432O94892 652 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 GLSO94925 669 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 RAF1P04049 648 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 GP1BBP13224 206 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 MYF5P13349 255 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PGCP20142 388 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SSTR2P30874 369 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 LCN1P31025 176 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 RAD52P43351 418 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms