RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 PANX1Q96RD7 426 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 DCLRE1CQ96SD1 692 aaKnown RBP10.67□□□□□ -0.7
TRIM27-207ENST00000498117 SPATA9Q9BWV2 254 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 RNF121Q9H920 327 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 TCF7L2Q9NQB0 619 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 C1RLQ9NZP8 487 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 P2RX2Q9UBL9 471 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 RPS6KB2Q9UBS0 482 aa10.67□□□□□ -0.7
TRIM27-207ENST00000498117 SOX21Q9Y651 276 aaPredicted RBP10.67□□□□□ -0.7
TRIM27-207ENST00000498117 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 A0A087WUJ7 227 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 A8MXK9 166 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 SRRM5B3KS81 715 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 TM9SF1O15321 606 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 ZNF500O60304 480 aaPredicted RBP10.66□□□□□ -0.7
TRIM27-207ENST00000498117 MFN2O95140 757 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 FARS2O95363 451 aaKnown RBP10.66□□□□□ -0.7
TRIM27-207ENST00000498117 PLATP00750 562 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 IGHV2-70P01814 119 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 SELEP16581 610 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 LIPAP38571 399 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 CSNK1A1P48729 337 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 CLNS1AP54105 237 aaKnown RBP10.66□□□□□ -0.7
TRIM27-207ENST00000498117 CRISP3P54108 245 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 PLP2Q04941 152 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 PDCD1Q15116 288 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 MAPK11Q15759 364 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 ZNF718Q3SXZ3 478 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 PDCD4Q53EL6 469 aaKnown RBP10.66□□□□□ -0.7
TRIM27-207ENST00000498117 COX20Q5RI15 118 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 FIP1L1Q6UN15 594 aaKnown RBP10.66□□□□□ -0.7
TRIM27-207ENST00000498117 NHLRC1Q6VVB1 395 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 C4orf33Q8N1A6 199 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 SCAIQ8N9R8 606 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 NOA1Q8NC60 698 aaKnown RBP10.66□□□□□ -0.7
TRIM27-207ENST00000498117 OR1J1Q8NGS3 322 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 OR6S1Q8NH40 331 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 SLC41A3Q96GZ6 507 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 ASPNQ9BXN1 380 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 PRDM13Q9H4Q3 707 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 CYSLTR2Q9NS75 346 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 OR5V1Q9UGF6 321 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 IL20RAQ9UHF4 553 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 IFT52Q9Y366 437 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
TRIM27-207ENST00000498117 IQCMA0A1B0GVH7 501 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 KRT75O95678 551 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 ADH4P08319 380 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 CD80P33681 288 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 MMP15P51511 669 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 HOXC5Q00444 222 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 RELBQ01201 579 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 PUDPQ08623 228 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 WHAMMP3Q1A5X7 153 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 SLC36A2Q495M3 483 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 ESCO2Q56NI9 601 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 BTNL3Q6UXE8 466 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 LRRN1Q6UXK5 716 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 PXKQ7Z7A4 578 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 DNAJA4Q8WW22 397 aaPredicted RBP10.65□□□□□ -0.7
TRIM27-207ENST00000498117 SLC35B4Q969S0 331 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 UPRTQ96BW1 309 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 EPYCQ99645 322 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 SH3GL3Q99963 347 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 AKTIPQ9H8T0 292 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRIM27-207ENST00000498117 GLTPQ9NZD2 209 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 KLHL14Q9P2G3 628 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 ZDHHC8Q9ULC8 765 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
TRIM27-207ENST00000498117 A0A0G2JPF8 293 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 MDFIC2A0A1B0GVS7 189 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 HNRNPCL2B2RXH8 293 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 HNRNPCL3B7ZW38 293 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 E9PBE3 544 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 PIN1P1O15428 100 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 HNRNPCL1O60812 293 aaKnown RBP10.64□□□□□ -0.71
TRIM27-207ENST00000498117 ERLIN1O75477 346 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 HNRNPCL4P0DMR1 293 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 AHCYP23526 432 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 APLNRP35414 380 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 SEC61A1P61619 476 aaKnown RBP10.64□□□□□ -0.71
TRIM27-207ENST00000498117 LRRC74AQ0VAA2 488 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 THEM4Q5T1C6 240 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 UNQ6126/PRO20091Q6UXV3 157 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 LRRC28Q86X40 367 aaPredicted RBP10.64□□□□□ -0.71
TRIM27-207ENST00000498117 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
TRIM27-207ENST00000498117 SLC38A5Q8WUX1 472 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 GEMIN6Q8WXD5 167 aaKnown RBP10.64□□□□□ -0.71
TRIM27-207ENST00000498117 TMEM54Q969K7 222 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 SLC19A3Q9BZV2 496 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 NANOGQ9H9S0 305 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 PPCSQ9HAB8 311 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 NOX4Q9NPH5 578 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
TRIM27-207ENST00000498117 TMEM106BQ9NUM4 274 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms