RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LACC1Q8IV20 430 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 ZNRF1Q8ND25 227 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 OR5AP2Q8NGF4 316 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 OR8J2Q8NGG1 315 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 CDC26Q8NHZ8 85 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 TRUB1Q8WWH5 349 aaKnown RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 DDB2Q92466 427 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 TM9SF4Q92544 642 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 GTF3AQ92664 365 aaKnown RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF486Q96H40 463 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 C7orf50Q9BRJ6 194 aaKnown RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 NAT9Q9BTE0 207 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 ADNPQ9H2P0 1102 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 RNF41Q9H4P4 317 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 ELOVL2Q9NXB9 296 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 THUMPD1Q9NXG2 353 aaKnown RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 EHFQ9NZC4 300 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 SENP1Q9P0U3 644 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 NXT1Q9UKK6 140 aaKnown RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 TSSC4Q9Y5U2 329 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 UTRNP46939 3433 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 PXDNLA1KZ92 1463 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 C10orf71Q711Q0 1435 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 SCN7AQ01118 1682 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 E7ESA3 106 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SMLR1H3BR10 107 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 PPP1R2P9O14990 202 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 EMC8O43402 210 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SOX15O60248 233 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CDC123O75794 336 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SC5DO75845 299 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CEACAM4O75871 244 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 NUDT14O95848 222 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ATP1A1P05023 1023 aaKnown RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CNR1P21554 472 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SYT1P21579 422 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 IL12AP29459 219 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CDC34P49427 236 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 FOXG1P55316 489 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 FBXW4P57775 412 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 GPX6P59796 221 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 PON2Q15165 354 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CCDC6Q16204 474 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CYP51A1Q16850 503 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ACER2Q5QJU3 275 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 OR52E8Q6IFG1 317 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 C1orf94Q6P1W5 598 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF549Q6P9A3 640 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 PLEKHG7Q6ZR37 379 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 TUBA1AQ71U36 451 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF546Q86UE3 836 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 PIM3Q86V86 326 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CCDC71Q8IV32 467 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ZBED8Q8IZ13 594 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 OR2AP1Q8NGE2 309 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 MAPK15Q8TD08 544 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 TCTEX1D2Q8WW35 142 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 BAALCQ8WXS3 180 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 MOCOSQ96EN8 888 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 TBX15Q96SF7 602 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 FAIM2Q9BWQ8 316 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ULBP2Q9BZM5 246 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SHCBP1LQ9BZQ2 653 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 NAA50Q9GZZ1 169 aaKnown RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SYT4Q9H2B2 425 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 SAV1Q9H4B6 383 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF385DQ9H6B1 395 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 WDR41Q9HAD4 459 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 IL1RAPQ9NPH3 570 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 DCDC2Q9UHG0 476 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 LAMB4A4D0S4 1761 aa5.05□□□□□ -1.6
BRCA1-224ENST00000497488 CARMIL3Q8ND23 1372 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 BCORQ6W2J9 1755 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 COL11A2P13942 1736 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 FAM231BA6NCW3 169 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 FABP12A6NFH5 140 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 FRAT2O75474 233 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ATP5HO75947 161 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 FCGR3AP08637 254 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 OCMP0CE72 109 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 CD1DP15813 335 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 PSMC3P17980 439 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 TEAD1P28347 426 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 HOXA9P31269 272 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 UGT2B10P36537 528 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ACVR1BP36896 505 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 DCTP40126 519 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ELK3P41970 407 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 CSNK1A1P48729 337 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ATP4BP51164 291 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 LIM2P55344 173 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 TSPAN5P62079 268 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 TRAM2Q15035 370 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 SF3A2Q15428 464 aaKnown RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 WDR38Q5JTN6 314 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 TPRG1LQ5T0D9 272 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 MFSD14CQ5VZR4 134 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 APOBEC3HQ6NTF7 200 aaKnown RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ADAM5Q6NVV9 412 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms