RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 FGFRL1Q8N441 504 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 BPIFB2Q8N4F0 458 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF781Q8N8C0 355 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZSCAN4Q8NAM6 433 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 STXBP6Q8NFX7 210 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR4D9Q8NGE8 314 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR1B1Q8NGR6 318 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR9A4Q8NGU2 314 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LILRB4Q8NHJ6 448 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MARCH1Q8TCQ1 289 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LRRC15Q8TF66 581 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MRPS31Q92665 395 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAB1CQ92928 201 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 NABP1Q96AH0 204 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMIGD2Q96BF3 282 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF524Q96C55 264 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LRRC39Q96DD0 335 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 OPALINQ96PE5 141 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MBOAT4Q96T53 435 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MEIS3Q99687 375 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 C1QTNF4Q9BXJ3 329 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RHBGQ9H310 441 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PPDPFQ9H3Y8 114 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RGCCQ9H4X1 137 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ELOVL6Q9H5J4 265 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 IKZF5Q9H5V7 419 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 HAUS4Q9H6D7 363 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF556Q9HAH1 456 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CYP3A43Q9HB55 503 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 NTN4Q9HB63 628 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LYRM4Q9HD34 91 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 IL26Q9NPH9 171 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MRPL40Q9NQ50 206 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC17A5Q9NRA2 495 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZFP57Q9NU63 452 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GPATCH2LQ9NWQ4 482 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GCNT4Q9P109 453 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 KCNG2Q9UJ96 466 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PRPF19Q9UMS4 504 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 SAMD4AQ9UPU9 718 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GAB2Q9UQC2 676 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 NTNG1Q9Y2I2 539 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 OARD1Q9Y530 152 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GMEB1Q9Y692 573 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CSMD3Q7Z407 3707 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 NCOA6Q14686 2063 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TP53BP1Q12888 1972 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 MUC4Q99102 2169 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 A0A0J9YVX5 310 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 KBTBD11-OT1A0A1B0GTJ5 212 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 A0A1B0GVL5 298 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 LINC00854A0A1B0GVQ3 168 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ERICH4A6NGS2 130 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR6C65A6NJZ3 312 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM74A7A6NL05 159 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SMIM1B2RUZ4 78 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 B4DXG7 233 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 H3BNX3 289 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 NTN3O00634 580 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HCRTR1O43613 425 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 KDELR3O43731 214 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PCDH7O60245 1069 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 DPM1O60762 260 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 CDC123O75794 336 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 NOL4O94818 638 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 AP2A1O95782 977 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TGM6O95932 706 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLPIP03973 132 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ALDOBP05062 364 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPLP0P05388 317 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 IGHV4-34P06331 123 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HCKP08631 526 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TPM1P09493 284 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TACSTD2P09758 323 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 H2AFZP0C0S5 128 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 NCK1P16333 377 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TCN2P20062 427 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ATP5A1P25705 553 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ANXA13P27216 316 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HNRNPH3P31942 346 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HSD17B2P37059 387 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FDFT1P37268 417 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 DDOSTP39656 456 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TSFMP43897 325 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 BRCC3P46736 316 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 STARP49675 285 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 EFNA3P52797 238 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PAX9P55771 341 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM50BP56557 158 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 LINC00205P59089 165 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAB10P61026 200 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPL8P62917 257 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PHEXP78562 749 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 NUCB2P80303 420 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 CDK16Q00536 496 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 OC90Q02509 493 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms