RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CTPS2Q9NRF8 586 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 PCYOX1Q9UHG3 505 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 HEBP2Q9Y5Z4 205 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 PRRC2AP48634 2157 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 A0A1B0GVI7 797 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 A6NDX4 124 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ZNF726A6NNF4 738 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 IGHV3-43DP0DP04 118 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 CALM1P0DP23 149 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 CALM2P0DP24 149 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 CALM3P0DP25 149 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ADRB3P13945 408 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 RCC1P18754 421 aaPredicted RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 CCNCP24863 283 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 SERPINB5P36952 375 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 NSG1P42857 185 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 RORCP51449 518 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ZNF133P52736 654 aaPredicted RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 PRRX1P54821 245 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 FGF8P55075 233 aaPredicted RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 C21orf59P57076 290 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 RAB10P61026 200 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ADARB1P78563 741 aaKnown RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 CKAP4Q07065 602 aaKnown RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 ECH1Q13011 328 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 CLINT1Q14677 625 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ZNF658BQ4V348 819 aaPredicted RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 TMEM255AQ5JRV8 349 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 VAX1Q5SQQ9 334 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 CYB5R2Q6BCY4 276 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ZNF836Q6ZNA1 936 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 TMEM179Q6ZVK1 233 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 Q8N9W7 124 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 OR51G1Q8NGK1 321 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 OR52K2Q8NGK3 314 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 OR1S2Q8NGQ3 325 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 FAM81AQ8TBF8 368 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 ACMSDQ8TDX5 336 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 TMEM54Q969K7 222 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 PIK3IP1Q96FE7 263 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 AURKBQ96GD4 344 aaPredicted RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 ATP5SQ99766 215 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 C20orf24Q9BUV8 137 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 RACGAP1Q9H0H5 632 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 TMEM185BQ9H7F4 350 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 STOX2Q9P2F5 926 aaPredicted RBP2.69□□□□□ -1.98
SMC4-225ENST00000497203 PITPNC1Q9UKF7 332 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 TRAPPC4Q9Y296 219 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 TP53TG5Q9Y2B4 290 aa2.69□□□□□ -1.98
SMC4-225ENST00000497203 IGKV1D-13A0A0B4J2D9 117 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 PRSS37A4D1T9 235 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 PANO1I0J062 215 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 LAD1O00515 517 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 RAB29O14966 203 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 MRPS12O15235 138 aaKnown RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 H6PDO95479 791 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 ZDHHC11BP0C7U3 371 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 IGKV1-13P0DP09 117 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 MDKP21741 143 aaPredicted RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 AK4P27144 223 aaPredicted RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 RFX3P48380 749 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 NMUP48645 174 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 TMED10P49755 219 aaKnown RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 ZNF621Q6ZSS3 439 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 BZW1Q7L1Q6 419 aaKnown RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 ASCL5Q7RTU5 278 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 MREGQ8N565 214 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 MDS2Q8NDY4 140 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 CD300LFQ8TDQ1 290 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 KIFAP3Q92845 792 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 ASB9Q96DX5 294 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 TSSK3Q96PN8 268 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 P2RX4Q99571 388 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 GABARAPL3Q9BY60 117 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 ZNF160Q9HCG1 818 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 DEC1Q9P2X7 70 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 UXTQ9UBK9 157 aaPredicted RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 LSM7Q9UK45 103 aaKnown RBP2.68□□□□□ -1.98
SMC4-225ENST00000497203 ING4Q9UNL4 249 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 GOLT1BQ9Y3E0 138 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 NINLQ9Y2I6 1382 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 ARHGAP21Q5T5U3 1957 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 LTBP1Q14766 1721 aa2.68□□□□□ -1.98
SMC4-225ENST00000497203 TRBV6-6A0A0A6YYG2 114 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 FAM166BA8MTA8 275 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 SIRPB1O00241 398 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 PES1O00541 588 aaKnown RBP2.67□□□□□ -1.98
SMC4-225ENST00000497203 NDUFAB1O14561 156 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 DFNA5O60443 496 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 CDH16O75309 829 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 CA11O75493 328 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 OR2J3O76001 311 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 CLIC3O95833 236 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 SLC25A27O95847 323 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 C6orf47O95873 294 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 BGLAPP02818 100 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 ANXA5P08758 320 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 GALP22466 123 aa2.67□□□□□ -1.98
SMC4-225ENST00000497203 SLC1A1P43005 524 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms