RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RBM18Q96H35 190 aaKnown RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 URB1-AS1Q96HZ7 61 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 SFXN2Q96NB2 322 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 WFIKKN1Q96NZ8 548 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 HBEGFQ99075 208 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 PAIP2Q9BPZ3 127 aaKnown RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 KLHDC3Q9BQ90 382 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 CENPKQ9BS16 269 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 REG4Q9BYZ8 158 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 NMRAL1Q9HBL8 299 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 HHATLQ9HCP6 504 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 RRAGDQ9NQL2 400 aaPredicted RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 FARSBQ9NSD9 589 aaKnown RBP3.71□□□□□ -1.82
VPS52-222ENST00000495981 SLCO1C1Q9NYB5 712 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 TAS2R3Q9NYW6 316 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 KLRF1Q9NZS2 232 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 ACTR3BQ9P1U1 418 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 TBK1Q9UHD2 729 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 ZNF225Q9UK10 706 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 ACOT9Q9Y305 439 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 SNX24Q9Y343 169 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 ZNF175Q9Y473 711 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 DYSFO75923 2080 aa3.71□□□□□ -1.82
VPS52-222ENST00000495981 FREM1Q5H8C1 2179 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 IGLV3-32A0A0A0MS00 114 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 ELOVL7A1L3X0 281 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 GOLGA6L10A6NI86 522 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 A8MT66 165 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 EMC8O43402 210 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 PRAF2O60831 178 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SS18L1O75177 396 aaPredicted RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 PROP1O75360 226 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 AQP8O94778 261 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 IGLV2-14P01704 120 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 LCATP04180 440 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 C2P06681 752 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 KLK1P06870 262 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 ABHD2P08910 425 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SPP1P10451 314 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 GFAPP14136 432 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 DRD5P21918 477 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 AHCYP23526 432 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 CRABP2P29373 138 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SLC6A6P31641 620 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 FEN1P39748 380 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 PPICP45877 212 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 CAMLGP49069 296 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SERPINB8P50452 374 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 XKP51811 444 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SUCLG1P53597 346 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 DIO3P55073 304 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 ZP1P60852 638 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 RPP38P78345 283 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 COL10A1Q03692 680 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 SRYQ05066 204 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 C2orf54Q08AI8 447 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 GANABQ14697 944 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 SF3B4Q15427 424 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS52-222ENST00000495981 TRADDQ15628 312 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 BCL2A1Q16548 175 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 TRMT12Q53H54 448 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 C6orf52Q5T4I8 152 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 GCNT6Q5T4J0 391 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 MFSD12Q6NUT3 480 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 ENPP6Q6UWR7 440 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 BTNL8Q6UX41 500 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 ZNF704Q6ZNC4 412 aaPredicted RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 RPS27LQ71UM5 84 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 LDLRAD3Q86YD5 345 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 CTAGE3PQ8IX95 158 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 AQP12AQ8IXF9 295 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 C1orf52Q8N6N3 182 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 ZNF611Q8N823 705 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 OR7G2Q8NG99 324 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 OR4F6Q8NGB9 312 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 OR4K14Q8NGD5 310 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 OR52I2Q8NH67 350 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 VANGL1Q8TAA9 524 aaPredicted RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 FNDC9Q8TBE3 224 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 RDH11Q8TC12 318 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 PYROXD1Q8WU10 500 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 PIGTQ969N2 578 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 EFHD2Q96C19 240 aaPredicted RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 ADGRG7Q96K78 797 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 COL21A1Q96P44 957 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 MYCBPQ99417 103 aaPredicted RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 SERPINI1Q99574 410 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 NAPGQ99747 312 aaPredicted RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 LMF2Q9BU23 707 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 MED18Q9BUE0 208 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 NTMT1Q9BV86 223 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 QTRT1Q9BXR0 403 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 ACPTQ9BZG2 426 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 DPH5Q9H2P9 285 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 WDR41Q9HAD4 459 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 FOLH1BQ9HBA9 442 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 CDH20Q9HBT6 801 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 ZDHHC18Q9NUE0 388 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms