RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 C17orf105B2RV13 164 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 RLN1P04808 185 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 NFYAP23511 347 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-217ENST00000495688 KIR3DL2P43630 455 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 FZD2Q14332 565 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 NHLRC3Q5JS37 347 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 PXDC1Q5TGL8 231 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 ALKAL2Q6UX46 152 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 C3P1Q6ZMU1 363 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF563Q8TA94 476 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 ADOQ96SZ5 270 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 GINS4Q9BRT9 223 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 UBQLN4Q9NRR5 601 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 GTF2A1LQ9UNN4 478 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 ASXL3Q9C0F0 2248 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 THADAQ6YHU6 1953 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 MCRIP1C9JLW8 97 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 RBBP9O75884 186 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 OR2A4O95047 310 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 GIPP09681 153 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-217ENST00000495688 ACSM4P0C7M7 580 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 THEGLP0DJG4 465 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 PNMTP11086 282 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-217ENST00000495688 WDR38Q5JTN6 314 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 KCTD20Q7Z5Y7 419 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 CXorf58Q96LI9 332 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 PNO1Q9NRX1 252 aaKnown RBP11.79□□□□□ -0.52
PTPN7-217ENST00000495688 NUP50Q9UKX7 468 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 MOKQ9UQ07 419 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 SLC22A13Q9Y226 551 aa11.79□□□□□ -0.52
PTPN7-217ENST00000495688 SPTY2D1-AS1A0A0U1RR47 76 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 H7C417 338 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF264O43296 627 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 XRCC3O43542 346 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 DOK2O60496 412 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF254O75437 659 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 CTAG2O75638 210 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 CCKBRP32239 447 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 RABIFP47224 123 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 EPHA4P54764 986 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 MRPS10P82664 201 aaKnown RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 MELKQ14680 651 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 ASPHD2Q6ICH7 369 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 OR51S1Q8NGJ8 323 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 OR8D2Q9GZM6 311 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 CHST6Q9GZX3 395 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 MTFP1Q9UDX5 166 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 STEAP1Q9UHE8 339 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 RABL2BQ9UNT1 228 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 ETV7Q9Y603 341 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 TRAV18A0A075B6X5 111 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 A0A1B0GTQ1 180 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 GGT3PA6NGU5 568 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 SCDO00767 359 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 SUSD5O60279 629 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 UTS2O95399 124 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 HLA-DQA2P01906 255 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 POU3F4P49335 361 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 CENPAP49450 140 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 SLC36A1Q7Z2H8 476 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 PLPP7Q8NBV4 271 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 PTPMT1Q8WUK0 201 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 TSEN15Q8WW01 171 aaKnown RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 COMMD4Q9H0A8 199 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 GPN1Q9HCN4 374 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-217ENST00000495688 GMEB2Q9UKD1 530 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 FRYLO94915 3013 aa11.78□□□□□ -0.52
PTPN7-217ENST00000495688 TEX51A0A1B0GUA7 166 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 OR5K4A6NMS3 321 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 NSA2O95478 260 aaKnown RBP11.77□□□□□ -0.52
PTPN7-217ENST00000495688 WNT11O96014 354 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 PNPP00491 289 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF35P13682 527 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.52
PTPN7-217ENST00000495688 RAP2BP61225 183 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 ETFDHQ16134 617 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 MEP1BQ16820 701 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 OR7E24Q6IFN5 339 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 DNM1P46Q6ZS02 220 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 MDGA2Q7Z553 956 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 FAM160A2Q8N612 972 aaPredicted RBP11.77□□□□□ -0.52
PTPN7-217ENST00000495688 GALNT11Q8NCW6 608 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 LIPHQ8WWY8 451 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 MCHR2Q969V1 340 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 KLHL15Q96M94 604 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 GAL3ST4Q96RP7 486 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 INTS14Q96SY0 518 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 UTP23Q9BRU9 249 aaKnown RBP11.77□□□□□ -0.52
PTPN7-217ENST00000495688 CLEC1BQ9P126 229 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms