RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 FGD3Q5JSP0 725 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 LRFN4Q6PJG9 635 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 WDFY1Q8IWB7 410 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 SLC22A24Q8N4F4 322 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 SYT14Q8NB59 555 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 RBM15BQ8NDT2 890 aaKnown RBP15.33■□□□□ 0.04
HDAC4-211ENST00000494800 NUP37Q8NFH4 326 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 OR51A7Q8NH64 312 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 MCHR2Q969V1 340 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 PYURFQ96I23 114 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 COX4I2Q96KJ9 171 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 MRPL13Q9BYD1 178 aaKnown RBP15.33■□□□□ 0.04
HDAC4-211ENST00000494800 KCNN2Q9H2S1 579 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 TMEM38BQ9NVV0 291 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 B3GNT2Q9NY97 397 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 NDUFAF4Q9P032 175 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 ROS1P08922 2347 aa15.33■□□□□ 0.04
HDAC4-211ENST00000494800 TEP1Q99973 2627 aaKnown RBP15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TRIM64A6NGJ6 449 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TRIM64BA6NI03 449 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 A6NIZ1 184 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 H7C417 338 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 hCG_2039718K7EN88 272 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TRMUO75648 421 aaKnown RBP15.32■□□□□ 0.04
HDAC4-211ENST00000494800 IGHV4-39P01824 125 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 CELA3BP08861 270 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 MAKP20794 623 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 SERPINF1P36955 418 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 NUDT6P53370 316 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 CTXN1P60606 82 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 RAP1BP61224 184 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 RAP1AP62834 184 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 CD47Q08722 323 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TOP3AQ13472 1001 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-211ENST00000494800 FXNQ16595 210 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 HIST3H3Q16695 136 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 SLC36A2Q495M3 483 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 ARMC4Q5T2S8 1044 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TMEM53Q6P2H8 277 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 VHLLQ6RSH7 139 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TMPRSS11FQ6ZWK6 438 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 ARHGAP24Q8N264 748 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 FITM2Q8N6M3 262 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 FBXO17Q96EF6 278 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 NSL1Q96IY1 281 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF347Q96SE7 839 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 SEPHS2Q99611 448 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 SMURF2Q9HAU4 748 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 CD300AQ9UGN4 299 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 V9GYQ6 96 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 MED13LQ71F56 2210 aa15.32■□□□□ 0.04
HDAC4-211ENST00000494800 TRAV27A0A087WT01 109 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 IGHV2OR16-5A0A0B4J2B6 119 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF503-AS2A6NEH8 195 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 B2RBV5 119 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 B9A039 149 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 SMAD7O15105 426 aaKnown RBP15.31■□□□□ 0.04
HDAC4-211ENST00000494800 ARPC2O15144 300 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 IGHMP01871 453 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 CALB2P22676 271 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 CALCRP30988 508 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 RPL4P36578 427 aaKnown RBP15.31■□□□□ 0.04
HDAC4-211ENST00000494800 GUCA1AP43080 201 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-211ENST00000494800 GPR4P46093 362 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 GIPRP48546 466 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 RPL27P61353 136 aaKnown RBP15.31■□□□□ 0.04
HDAC4-211ENST00000494800 MYBPC1Q00872 1141 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 GALK2Q01415 458 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 RUNX1T1Q06455 604 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 TBPL2Q6SJ96 375 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 CLEC9AQ6UXN8 241 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 SLC16A14Q7RTX9 510 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 SKA3Q8IX90 412 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 OR13C2Q8NGS9 318 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 SLC7A13Q8TCU3 470 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 RBP7Q96R05 134 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 ALG12Q9BV10 488 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 ZNF442Q9H7R0 627 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 RNF121Q9H920 327 aa15.31■□□□□ 0.04
HDAC4-211ENST00000494800 GDF2Q9UK05 429 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-211ENST00000494800 SSX4O60224 188 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 PTHP01270 115 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 OR4A8P0C604 315 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 NPR2P20594 1047 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 ACVR1BP36896 505 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 DSCR9P59020 149 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 LSM11P83369 360 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC4-211ENST00000494800 VLDLRP98155 873 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 DAG1Q14118 895 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 ZBED5Q49AG3 693 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 THEM4Q5T1C6 240 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 C10orf128Q5T292 105 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 PODNL1Q6PEZ8 512 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 OR4K5Q8NGD3 323 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 C7orf34Q96L11 122 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 TNFRSF13CQ96RJ3 184 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 RHNO1Q9BSD3 238 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 C1orf198Q9H425 327 aa15.3■□□□□ 0.04
HDAC4-211ENST00000494800 SEC61A2Q9H9S3 476 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms