RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
LIME1-209ENST00000494776 KRT36O76013 467 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 NDUFB2O95178 105 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 FARS2O95363 451 aaKnown RBP13.89□□□□□ -0.19
LIME1-209ENST00000494776 IGHMP01871 453 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 HLA-HP01893 362 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 CRYAAP02489 173 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 OR8G3PP0DMU2 310 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 CBR1P16152 277 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 ARR3P36575 388 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 RASSF2P50749 326 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 IDH3GP51553 393 aaPredicted RBP13.89□□□□□ -0.19
LIME1-209ENST00000494776 RAP1BP61224 184 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 RAP1AP62834 184 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 ERVK-25P63136 954 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 PIGFQ07326 219 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 TESK1Q15569 626 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 GSG1Q2KHT4 349 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 FAM205BPQ63HN1 556 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 ZNF627Q7L945 461 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 MDP1Q86V88 176 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 LRRC75AQ8NAA5 344 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 HDAC2Q92769 488 aaKnown RBP13.89□□□□□ -0.19
LIME1-209ENST00000494776 RSRC1Q96IZ7 334 aaKnown RBP13.89□□□□□ -0.19
LIME1-209ENST00000494776 TSPAN32Q96QS1 320 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 RBP7Q96R05 134 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 CRNNQ9UBG3 495 aaPredicted RBP13.89□□□□□ -0.19
LIME1-209ENST00000494776 MOKQ9UQ07 419 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 AKAP9Q99996 3911 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 AKAP6Q13023 2319 aa13.89□□□□□ -0.19
LIME1-209ENST00000494776 F8P00451 2351 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 TNFRSF11BO00300 401 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 XKRYO14609 159 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 UBL3O95164 117 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 RAB36O95755 333 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 CD14P08571 375 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 CECR9P0C854 216 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 GUCA1AP43080 201 aaPredicted RBP13.88□□□□□ -0.19
LIME1-209ENST00000494776 LIMS1P48059 325 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 FABP6P51161 128 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 NKX6-1P78426 367 aaPredicted RBP13.88□□□□□ -0.19
LIME1-209ENST00000494776 BNIP1Q12981 228 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 FHL1Q13642 323 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 HIST3H3Q16695 136 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 C3orf36Q3SXR2 165 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 AGAP6Q5VW22 663 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 FBXL14Q8N1E6 418 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 SLC22A24Q8N4F4 322 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 FAM169BQ8N8A8 192 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 FNDC8Q8TC99 324 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 NSMAFQ92636 917 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 GTPBP3Q969Y2 492 aaKnown RBP13.88□□□□□ -0.19
LIME1-209ENST00000494776 SLC7A6OSQ96CW6 309 aaPredicted RBP13.88□□□□□ -0.19
LIME1-209ENST00000494776 PERPQ96FX8 193 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 KCNK17Q96T54 332 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 DHRS9Q9BPW9 319 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 FUZQ9BT04 418 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 ALG12Q9BV10 488 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 CXXC4Q9H2H0 198 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 TMEM38BQ9NVV0 291 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
LIME1-209ENST00000494776 ZNF503-AS2A6NEH8 195 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 E7EQL1 145 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ATP6V1G2-DDX39BF2Z307 99 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ACOT8O14734 319 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ARHGEF9O43307 516 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 TMCC2O75069 709 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 PTP4A3O75365 173 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ATP5HO75947 161 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 SLC2A10O95528 541 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 IGKV3-15P01624 115 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 SOD3P08294 240 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 RAP2AP10114 183 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 MAGEA2P43356 314 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 PTDSS1P48651 473 aaKnown RBP13.87□□□□□ -0.19
LIME1-209ENST00000494776 RAB1AP62820 205 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 NAAAQ02083 359 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 FLOT2Q14254 428 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 THEM4Q5T1C6 240 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 SPNS3Q6ZMD2 512 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ZER1Q7Z7L7 766 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 SKA3Q8IX90 412 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ARIH2OSQ8N7S6 290 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 GNPDA2Q8TDQ7 276 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ZNF570Q96NI8 536 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 SH3GL3Q99963 347 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 KCNN2Q9H2S1 579 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 RNF121Q9H920 327 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 IL20RAQ9UHF4 553 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 ADAM18Q9Y3Q7 739 aa13.87□□□□□ -0.19
LIME1-209ENST00000494776 TEP1Q99973 2627 aaKnown RBP13.87□□□□□ -0.19
LIME1-209ENST00000494776 AQP12BA6NM10 295 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 IGLV1-44P01699 117 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 CELA3BP08861 270 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 DANCRP0C864 163 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 GIPRP48546 466 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 RPS6KA3P51812 740 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 FMODQ06828 376 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 PGGHGQ32M88 737 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 SLC36A2Q495M3 483 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms