RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 RIMKLAQ8IXN7 391 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 OR2T34Q8NGX1 318 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 DTNBP1Q96EV8 351 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 MED8Q96G25 268 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 KCTD14Q9BQ13 255 aaPredicted RBP2.62□□□□□ -1.99
NCL-210ENST00000494618 PARD6BQ9BYG5 372 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 ISYNA1Q9NPH2 558 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 SHPKQ9UHJ6 478 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 SNX6Q9UNH7 406 aa2.62□□□□□ -1.99
NCL-210ENST00000494618 MRPS7Q9Y2R9 242 aaKnown RBP2.62□□□□□ -1.99
NCL-210ENST00000494618 COL27A1Q8IZC6 1860 aaPredicted RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 IGLV3-12A0A075B6K2 115 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 GOLGA8SH3BPF8 625 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 RHOBTB1O94844 696 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 GABARAPO95166 117 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 LINC00869P0C866 280 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 FOLR1P15328 257 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 CALRP27797 417 aaKnown RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 POLR2FP61218 127 aaKnown RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 CDK16Q00536 496 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 ELP6Q0PNE2 266 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 SYCNQ0VAF6 134 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 STPG2Q8N412 459 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 CEP112Q8N8E3 955 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 ZNF557Q8N988 423 aaPredicted RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 TM4SF18Q96CE8 201 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 RPRD1AQ96P16 312 aaPredicted RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 MFFQ9GZY8 342 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 RAB33BQ9H082 229 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 RMND5AQ9H871 391 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 LIN28AQ9H9Z2 209 aaKnown RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 POLE4Q9NR33 117 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 SH3BGRL2Q9UJC5 107 aa2.61□□□□□ -1.99
NCL-210ENST00000494618 GPATCH8Q9UKJ3 1502 aaKnown RBP2.61□□□□□ -1.99
NCL-210ENST00000494618 IGHV3-74A0A0B4J1X5 117 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 GUCA1CO95843 209 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 FABP3P05413 133 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 IQCF3P0C7M6 154 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 DBTP11182 482 aaKnown RBP2.6□□□□□ -1.99
NCL-210ENST00000494618 CX3CR1P49238 355 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 ARG2P78540 354 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 TCP10Q12799 353 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 POU2AF1Q16633 256 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 Q6ZPB1 254 aaPredicted RBP2.6□□□□□ -1.99
NCL-210ENST00000494618 TMEM135Q86UB9 458 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 OR5D13Q8NGL4 314 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.6□□□□□ -1.991e-8■■□□□ 13.2
NCL-210ENST00000494618 HSFY1Q96LI6 401 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 MS4A4EQ96PG1 132 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 OR8B4Q96RC9 309 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 FAIM2Q9BWQ8 316 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 GPATCH2LQ9NWQ4 482 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 KIAA1257Q9ULG3 409 aa2.6□□□□□ -1.99
NCL-210ENST00000494618 TMEM223A0PJW6 202 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 RAD51BO15315 384 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 ERLIN2O94905 339 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 CLDN9O95484 217 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 IGHV2-5P01817 119 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 CSNK1A1P48729 337 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 PON3Q15166 354 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 NCCRP1Q6ZVX7 275 aaPredicted RBP2.59□□□□□ -1.99
NCL-210ENST00000494618 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 TRPV1Q8NER1 839 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 OR2G2Q8NGZ5 317 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 OR4S2Q8NH73 311 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 LKAAEAR1Q8TD35 194 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 COPS8Q99627 209 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 MRPL37Q9BZE1 423 aaKnown RBP2.59□□□□□ -1.99
NCL-210ENST00000494618 PARP12Q9H0J9 701 aaKnown RBP2.59□□□□□ -1.99
NCL-210ENST00000494618 NIPAL2Q9H841 368 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 ATP6V0A2Q9Y487 856 aa2.59□□□□□ -1.99
NCL-210ENST00000494618 IGLV1-50A0A075B6I6 118 aa2.58□□□□□ -2
NCL-210ENST00000494618 TRAV39A0A0B4J263 110 aa2.58□□□□□ -2
NCL-210ENST00000494618 CPLX1O14810 134 aa2.58□□□□□ -2
NCL-210ENST00000494618 FCMRO60667 390 aa2.58□□□□□ -2
NCL-210ENST00000494618 PRPHP41219 470 aa2.58□□□□□ -2
NCL-210ENST00000494618 YAP1P46937 504 aaKnown RBP2.58□□□□□ -2
NCL-210ENST00000494618 FGL1Q08830 312 aa2.58□□□□□ -2
NCL-210ENST00000494618 SF3A2Q15428 464 aaKnown RBP2.58□□□□□ -2
NCL-210ENST00000494618 EXOC3L2Q2M3D2 409 aa2.58□□□□□ -2
NCL-210ENST00000494618 RABL6Q3YEC7 729 aaPredicted RBP2.58□□□□□ -2
NCL-210ENST00000494618 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
NCL-210ENST00000494618 PUSL1Q8N0Z8 303 aaKnown RBP2.58□□□□□ -2
NCL-210ENST00000494618 ESR2Q92731 530 aa2.58□□□□□ -2
NCL-210ENST00000494618 RBMXL1Q96E39 390 aaKnown RBP2.58□□□□□ -2
NCL-210ENST00000494618 FOXC2Q99958 501 aa2.58□□□□□ -2
NCL-210ENST00000494618 RARRES2Q99969 163 aa2.58□□□□□ -2
NCL-210ENST00000494618 PPA2Q9H2U2 334 aa2.58□□□□□ -2
NCL-210ENST00000494618 AZI2Q9H6S1 392 aa2.58□□□□□ -2
NCL-210ENST00000494618 C12orf10Q9HB07 376 aa2.58□□□□□ -2
NCL-210ENST00000494618 PTPRTO14522 1441 aa2.58□□□□□ -2
NCL-210ENST00000494618 ZNF726A6NNF4 738 aa2.57□□□□□ -2
NCL-210ENST00000494618 SGK1O00141 431 aa2.57□□□□□ -2
NCL-210ENST00000494618 GMFGO60234 142 aa2.57□□□□□ -2
NCL-210ENST00000494618 OR7A10O76100 309 aa2.57□□□□□ -2
NCL-210ENST00000494618 HLA-DPB1P04440 258 aa2.57□□□□□ -2
NCL-210ENST00000494618 BCHEP06276 602 aa2.57□□□□□ -2
NCL-210ENST00000494618 C2P06681 752 aa2.57□□□□□ -2
NCL-210ENST00000494618 CD1CP29017 333 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms