RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 GRIP1Q9Y3R0 1128 aa10.82□□□□□ -0.68
SKA1-205ENST00000494518 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 EVPLLA8MZ36 301 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 SERPINB7O75635 380 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 RP2O75695 350 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 MFN2O95140 757 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 TFP02787 698 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 THY1P04216 161 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 SERPINA5P05154 406 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 LCKP06239 509 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 SLC18A1P54219 525 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 LMO4P61968 165 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 ACTG1P63261 375 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 CCL8P80075 99 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 RBBP4Q09028 425 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 SELPLGQ14242 412 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 DUSP7Q16829 419 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 ENTPD8Q5MY95 495 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 LRFN4Q6PJG9 635 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 UGT2A3Q6UWM9 527 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 TSPYL5Q86VY4 417 aaPredicted RBP10.81□□□□□ -0.68
SKA1-205ENST00000494518 GPR32P1Q8NGA4 272 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 OR4K5Q8NGD3 323 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 OR4D11Q8NGI4 311 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 OR6T1Q8NGN1 323 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 OR51F2Q8NH61 342 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 TMEM38AQ9H6F2 299 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 CDH20Q9HBT6 801 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 TMEM38BQ9NVV0 291 aa10.81□□□□□ -0.68
SKA1-205ENST00000494518 TANC2Q9HCD6 1990 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 CHP2O43745 196 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 LYPD3O95274 346 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 MT-ATP6P00846 226 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 AVPP01185 164 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 QDPRP09417 244 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 UMPSP11172 480 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 GPX2P18283 190 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 MRPL19P49406 292 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 KLF3P57682 345 aaPredicted RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 MTPNP58546 118 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 HNRNPA0Q13151 305 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 ZNF74Q16587 644 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 TSTQ16762 297 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 CYP51A1Q16850 503 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 REP15Q6BDI9 236 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 TMEM154Q6P9G4 183 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 C1orf229Q6ZS94 237 aaPredicted RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 PIWIL3Q7Z3Z3 882 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 PTOV1Q86YD1 416 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 LRRC18Q8N456 261 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 OR6X1Q8NH79 312 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 ZNF566Q969W8 418 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 THOC1Q96FV9 657 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 ZNF347Q96SE7 839 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 HINT3Q9NQE9 182 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 TAS2R5Q9NYW4 299 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
SKA1-205ENST00000494518 CACNG2Q9Y698 323 aa10.8□□□□□ -0.68
SKA1-205ENST00000494518 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 M0QX08 132 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 DHHO43323 396 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 TPD52L2O43399 206 aaKnown RBP10.79□□□□□ -0.68
SKA1-205ENST00000494518 PGA4P0DJD7 388 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 PGA3P0DJD8 388 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 OR8G3PP0DMU2 310 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 ADRA2CP18825 462 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 TMEM33P57088 247 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 PCBP3P57721 371 aaKnown RBP10.79□□□□□ -0.68
SKA1-205ENST00000494518 CLRN1P58418 232 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 RUNDC3AQ59EK9 446 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 TMEM53Q6P2H8 277 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 ZNF613Q6PF04 617 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 TTC33Q6PID6 262 aaPredicted RBP10.79□□□□□ -0.68
SKA1-205ENST00000494518 DLEU7Q6UYE1 221 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 LINC00114Q6XXX2 140 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 SLC16A14Q7RTX9 510 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 DHDDSQ86SQ9 333 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 SYT14Q8NB59 555 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 C11orf65Q8NCR3 313 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 BHLHE22Q8NFJ8 381 aaPredicted RBP10.79□□□□□ -0.68
SKA1-205ENST00000494518 SYNPRQ8TBG9 265 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 LRRC8CQ8TDW0 803 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 ADAMTS16Q8TE57 1224 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 SNX33Q8WV41 574 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 SLC25A44Q96H78 314 aaPredicted RBP10.79□□□□□ -0.68
SKA1-205ENST00000494518 C7orf26Q96N11 449 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 CCDC28BQ9BUN5 200 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 ZNF416Q9BWM5 594 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 DENND2DQ9H6A0 471 aaPredicted RBP10.79□□□□□ -0.68
SKA1-205ENST00000494518 ZNF665Q9H7R5 613 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 NANSQ9NR45 359 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 FBXL3Q9UKT7 428 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 SLC7A7Q9UM01 511 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 CORO2BQ9UQ03 480 aa10.79□□□□□ -0.68
SKA1-205ENST00000494518 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 TRAV20A0A0B4J274 112 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 BLOC1S5-TXNDC5H3BN57 136 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 MPZL1O95297 269 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
SKA1-205ENST00000494518 BCL10O95999 233 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms