RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 A0A1W2PRQ8 180 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 SHISA9B4DS77 424 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 M0R082 166 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 M0R3H8 397 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ABCD4O14678 606 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 H1F0P07305 194 aaKnown RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 PTAFRP25105 342 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 YAP1P46937 504 aaKnown RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 SELENOPP49908 381 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ISL1P61371 349 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 RPS4XP62701 263 aaKnown RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 NPRL3Q12980 569 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 DGCR6Q14129 220 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF770Q6IQ21 691 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 LINC00471Q8N535 108 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 SCAIQ8N9R8 606 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF417Q8TAU3 575 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 TAAR8Q969N4 342 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ALKBH3Q96Q83 286 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF587Q96SQ5 575 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 FEVQ99581 238 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 APOL4Q9BPW4 351 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 FUZQ9BT04 418 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 NMNAT1Q9HAN9 279 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-209ENST00000494464 SLC17A5Q9NRA2 495 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 SEC14L4Q9UDX3 406 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 BLOC1S6Q9UL45 172 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 A4GNTQ9UNA3 340 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 CORINQ9Y5Q5 1042 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ARID1AO14497 2285 aa11.56□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF587BE7ETH6 402 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 OVOL3O00110 214 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 CHP2O43745 196 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 ATP6V1B1P15313 513 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF43P17038 809 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 GRPRP30550 384 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 ALDH3B2P48448 385 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 CDH11P55287 796 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 CD47Q08722 323 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 NPTX1Q15818 432 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 C9orf135Q5VTT2 229 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 FOXB2Q5VYV0 432 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 NIPAL3Q6P499 406 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 DEF8Q6ZN54 512 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 BIVMQ86UB2 503 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 WDR31Q8NA23 367 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 ANKK1Q8NFD2 765 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 OR6T1Q8NGN1 323 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-209ENST00000494464 SMAP2Q8WU79 429 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-209ENST00000494464 NEUROG1Q92886 237 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 SLC41A3Q96GZ6 507 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 C18orf12Q96KH6 178 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 HRASLS5Q96KN8 279 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 MCHR1Q99705 422 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 POLR2J2Q9GZM3 115 aaKnown RBP11.55□□□□□ -0.56
ERCC3-209ENST00000494464 POLR2J3Q9H1A7 115 aaKnown RBP11.55□□□□□ -0.56
ERCC3-209ENST00000494464 ANKRD19PQ9H560 264 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF556Q9HAH1 456 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 OBP2BQ9NPH6 170 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 FAIMQ9NVQ4 179 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 TMCC3Q9ULS5 477 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 LAMP3Q9UQV4 416 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 MTORP42345 2549 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 CADP27708 2225 aa11.55□□□□□ -0.56
ERCC3-209ENST00000494464 TRAF3IP2O43734 574 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 AKAP8O43823 692 aaKnown RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 KRT33AO76009 404 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF432O94892 652 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 BGLAPP02818 100 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 SOD3P08294 240 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 CCDC159P0C7I6 412 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 PAX7P23759 505 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 CRHBPP24387 322 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 CD40P25942 277 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF83P51522 516 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 SH3BGRP55822 239 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 CLDN17P56750 224 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 CXCR4P61073 352 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 TEKQ02763 1124 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 PGGHGQ32M88 737 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ENTPD8Q5MY95 495 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 C6orf141Q5SZD1 244 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ZNF773Q6PK81 442 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 KLHL24Q6TFL4 600 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 LINC00114Q6XXX2 140 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 H1FNTQ75WM6 255 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 TSPYL5Q86VY4 417 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 RBM45Q8IUH3 476 aaKnown RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 OR52J3Q8NH60 311 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 COX4I2Q96KJ9 171 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 Q96MF0 132 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 MRPL39Q9NYK5 338 aaKnown RBP11.54□□□□□ -0.56
ERCC3-209ENST00000494464 ACANP16112 2415 aa11.54□□□□□ -0.56
ERCC3-209ENST00000494464 TRBV4-1A0A0J9YWV2 114 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms