RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 AQP4P55087 323 aa11□□□□□ -0.65
SNX17-208ENST00000493711 SIRPAP78324 504 aa11□□□□□ -0.65
SNX17-208ENST00000493711 ADARB1P78563 741 aaKnown RBP11□□□□□ -0.65
SNX17-208ENST00000493711 MELKQ14680 651 aa11□□□□□ -0.65
SNX17-208ENST00000493711 HIST3H3Q16695 136 aa11□□□□□ -0.65
SNX17-208ENST00000493711 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
SNX17-208ENST00000493711 MESTQ5EB52 335 aa11□□□□□ -0.65
SNX17-208ENST00000493711 SLC35F1Q5T1Q4 408 aa11□□□□□ -0.65
SNX17-208ENST00000493711 FBXW9Q5XUX1 488 aa11□□□□□ -0.65
SNX17-208ENST00000493711 PLXDC2Q6UX71 529 aa11□□□□□ -0.65
SNX17-208ENST00000493711 NUFIP2Q7Z417 695 aaKnown RBP11□□□□□ -0.65
SNX17-208ENST00000493711 FJX1Q86VR8 437 aa11□□□□□ -0.65
SNX17-208ENST00000493711 LSRQ86X29 649 aaPredicted RBP11□□□□□ -0.65
SNX17-208ENST00000493711 RPRMLQ8N4K4 120 aa11□□□□□ -0.65
SNX17-208ENST00000493711 MARVELD2Q8N4S9 558 aa11□□□□□ -0.65
SNX17-208ENST00000493711 IQCF1Q8N6M8 205 aa11□□□□□ -0.65
SNX17-208ENST00000493711 OR52E2Q8NGJ4 325 aa11□□□□□ -0.65
SNX17-208ENST00000493711 OR2T4Q8NH00 348 aa11□□□□□ -0.65
SNX17-208ENST00000493711 OR4K13Q8NH42 304 aa11□□□□□ -0.65
SNX17-208ENST00000493711 TFAP2CQ92754 450 aa11□□□□□ -0.65
SNX17-208ENST00000493711 TMEM54Q969K7 222 aa11□□□□□ -0.65
SNX17-208ENST00000493711 RASD2Q96D21 266 aa11□□□□□ -0.65
SNX17-208ENST00000493711 STARD4Q96DR4 205 aa11□□□□□ -0.65
SNX17-208ENST00000493711 LRRC46Q96FV0 321 aa11□□□□□ -0.65
SNX17-208ENST00000493711 EMC6Q9BV81 110 aa11□□□□□ -0.65
SNX17-208ENST00000493711 GLTPQ9NZD2 209 aa11□□□□□ -0.65
SNX17-208ENST00000493711 UPB1Q9UBR1 384 aa11□□□□□ -0.65
SNX17-208ENST00000493711 Q9UFV3 132 aa11□□□□□ -0.65
SNX17-208ENST00000493711 FOXD3Q9UJU5 478 aaPredicted RBP11□□□□□ -0.65
SNX17-208ENST00000493711 RAB26Q9ULW5 256 aa11□□□□□ -0.65
SNX17-208ENST00000493711 TEX15Q9BXT5 2789 aa11□□□□□ -0.65
SNX17-208ENST00000493711 NCKAP5O14513 1909 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 SNTNA6NMZ2 147 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 ZNF587BE7ETH6 402 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 PRR23D1E9PI22 279 aaPredicted RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 RPL36A-HNRNPH2H7BZ11 118 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 CGAP01215 116 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 PRR23D2P0DMB1 279 aaPredicted RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 EPHA2P29317 976 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 SELENOPP49908 381 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 ZNF84P51523 738 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 ZNF133P52736 654 aaPredicted RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 SLC25A1P53007 311 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 SH3BGRP55822 239 aaPredicted RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 SNRPGP62308 76 aaKnown RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 TGFBR3Q03167 851 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 LGALS3BPQ08380 585 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 CD47Q08722 323 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 FOXF2Q12947 444 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 CAMK2DQ13557 499 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 P2RY6Q15077 328 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 TUSC1Q2TAM9 212 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 SLC25A30Q5SVS4 291 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 C1QTNF12Q5T7M4 302 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 MEDAGQ5VYS4 303 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 TMEM236Q5W0B7 351 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 CARD17Q5XLA6 110 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 LEG1Q6P5S2 330 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 TFAP2EQ6VUC0 442 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 Q6ZT83 130 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 PTCHD4Q6ZW05 846 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 BTLAQ7Z6A9 289 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 MRGPRGQ86SM5 289 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 C8orf59Q8N0T1 100 aaPredicted RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 UBE2J2Q8N2K1 259 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 FAM26EQ8N5C1 309 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 SLC37A3Q8NCC5 494 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 NAXEQ8NCW5 288 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 NPEPL1Q8NDH3 523 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 FAM81AQ8TBF8 368 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 TMEM163Q8TC26 289 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 HDAC2Q92769 488 aaKnown RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 Q96MT0 163 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 NMNAT3Q96T66 252 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 ULBP2Q9BZM5 246 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 H2AFY2Q9P0M6 372 aaPredicted RBP10.99□□□□□ -0.65
SNX17-208ENST00000493711 MALT1Q9UDY8 824 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 MOKQ9UQ07 419 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 RNF6Q9Y252 685 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 FKBP7Q9Y680 259 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 BOD1L1Q8NFC6 3051 aa10.99□□□□□ -0.65
SNX17-208ENST00000493711 PCNX3Q9H6A9 2034 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 PRODHO43272 600 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 KHDRBS3O75525 346 aaKnown RBP10.98□□□□□ -0.65
SNX17-208ENST00000493711 SMNDC1O75940 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX17-208ENST00000493711 BMP5P22003 454 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 CDKN2AP42771 156 aaKnown RBP10.98□□□□□ -0.65
SNX17-208ENST00000493711 UQCRFS1P47985 274 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
SNX17-208ENST00000493711 EFNB1P98172 346 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 TEKQ02763 1124 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 ZNF362Q5T0B9 420 aaPredicted RBP10.98□□□□□ -0.65
SNX17-208ENST00000493711 C10orf128Q5T292 105 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 XKRXQ6PP77 449 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 GID4Q8IVV7 300 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 TCEANCQ8N8B7 351 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 SYT14Q8NB59 555 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 SDR9C7Q8NEX9 313 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 RFKQ969G6 155 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 CCDC120Q96HB5 630 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms