RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KLHL24Q6TFL4 600 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 THSD4Q6ZMP0 1018 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 ZNF620Q6ZNG0 422 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 TMEM179BQ7Z7N9 219 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 SYT14Q8NB59 555 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 C1orf162Q8NEQ5 155 aaPredicted RBP10.17□□□□□ -0.78
CTSA-209ENST00000493522 OR52L1Q8NGH7 329 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 OR1K1Q8NGR3 316 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 GTPBP3Q969Y2 492 aaKnown RBP10.17□□□□□ -0.78
CTSA-209ENST00000493522 ZNF570Q96NI8 536 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 OR52D1Q9H346 318 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 PDP1Q9P0J1 537 aaPredicted RBP10.17□□□□□ -0.78
CTSA-209ENST00000493522 MGAT4BQ9UQ53 548 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 ADAM18Q9Y3Q7 739 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 AP4S1Q9Y587 144 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 CDH10Q9Y6N8 788 aa10.17□□□□□ -0.78
CTSA-209ENST00000493522 A0A1W2PR80 420 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 ERICH4A6NGS2 130 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 A6NIZ1 184 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 OR5H1A6NKK0 313 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 XKRYO14609 159 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 PTP4A3O75365 173 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 TRMUO75648 421 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 PPP1R3DO95685 299 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 THBDP07204 575 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 NR2C1P13056 603 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 ZNF26P17031 533 aaPredicted RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 CRYGSP22914 178 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 FASP25445 335 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 FXYD6P3P58550 94 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 RAP1BP61224 184 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 RAP1AP62834 184 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 ARF1P84077 181 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 MYBPC1Q00872 1141 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 RUNX1T1Q06455 604 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 KRR1Q13601 381 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 PPA1Q15181 289 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 ATP6AP1Q15904 470 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 HIKESHIQ53FT3 197 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 OR7E24Q6IFN5 339 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 C22orf34Q6ZV56 151 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 HS3ST5Q8IZT8 346 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 C17orf78Q8N4C9 275 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 WFDC11Q8NEX6 87 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 OR52N5Q8NH56 324 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 MAGEE2Q8TD90 523 aaPredicted RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 PYDC1Q8WXC3 89 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 HDAC2Q92769 488 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 TMEM54Q969K7 222 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 RASD2Q96D21 266 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 MUCL1Q96DR8 90 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 DUS3LQ96G46 650 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 C18orf12Q96KH6 178 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 LRR1Q96L50 414 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 SAMD8Q96LT4 415 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 Q96M85 177 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 GPX7Q96SL4 187 aaPredicted RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 USB1Q9BQ65 265 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 IFT27Q9BW83 186 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 DGCR6LQ9BY27 220 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 EGLN3Q9H6Z9 239 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 TBC1D23Q9NUY8 699 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 ARMC1Q9NVT9 282 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 GLTPQ9NZD2 209 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 KIF17Q9P2E2 1029 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 GRHPRQ9UBQ7 328 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 ZNF346Q9UL40 294 aaKnown RBP10.16□□□□□ -0.78
CTSA-209ENST00000493522 POFUT2Q9Y2G5 429 aa10.16□□□□□ -0.78
CTSA-209ENST00000493522 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 RAI1Q7Z5J4 1906 aaPredicted RBP10.15□□□□□ -0.78
CTSA-209ENST00000493522 A0A096LPE4 126 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 TEX13CA0A0J9YWL9 993 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 A0A1W2PPZ6 126 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 ARRDC5A6NEK1 342 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 ZNF99A8MXY4 864 aaPredicted RBP10.15□□□□□ -0.78
CTSA-209ENST00000493522 CENPBD1B2RD01 187 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 RPL36A-HNRNPH2H7BZ11 118 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 H7C1C5 153 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 SOCS2O14508 198 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 ARHGEF9O43307 516 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 SOX14O95416 240 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 GASTP01350 101 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 B4GALT1P15291 398 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 GSTM3P21266 225 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 RPS6KA3P51812 740 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 UBE2NP61088 152 aaKnown RBP10.15□□□□□ -0.78
CTSA-209ENST00000493522 LCN6P62502 163 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 FMODQ06828 376 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 RFX4Q33E94 735 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 TBRG1Q3YBR2 411 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 MESTQ5EB52 335 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 CLEC12AQ5QGZ9 265 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 TIMM23BQ5SRD1 257 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 GPR139Q6DWJ6 353 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 RPL13AP3Q6NVV1 102 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 ANKRD16Q6P6B7 361 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 SHQ1Q6PI26 577 aaKnown RBP10.15□□□□□ -0.78
CTSA-209ENST00000493522 DPY19L2P2Q6ZN68 376 aa10.15□□□□□ -0.78
CTSA-209ENST00000493522 P2RY8Q86VZ1 359 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms