RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 FBXW9Q5XUX1 488 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TMEM225Q6GV28 225 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 DEF8Q6ZN54 512 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 ZNF627Q7L945 461 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 SSX8Q7RTT4 187 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 YTHDF3Q7Z739 585 aaKnown RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 LRRC75AQ8NAA5 344 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 OR9K2Q8NGE7 335 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 OR5J2Q8NH18 312 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 VANGL1Q8TAA9 524 aaPredicted RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 SLC7A13Q8TCU3 470 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 FAM222BQ8WU58 562 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TMEM255BQ8WV15 326 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TMEM158Q8WZ71 300 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 FAM162AQ96A26 154 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 LRRC46Q96FV0 321 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 DACH2Q96NX9 599 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 MUS81Q96NY9 551 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 ZNF347Q96SE7 839 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 PIP5K1AQ99755 562 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 THTPAQ9BU02 230 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 FNDC11Q9BVV2 318 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 RBM24Q9BX46 236 aaKnown RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 TRIM15Q9C019 465 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 KLHL4Q9C0H6 718 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 C20orf141Q9NUB4 165 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 KCNN3Q9UGI6 736 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 SLC7A8Q9UHI5 535 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 PROCRQ9UNN8 238 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 POMPQ9Y244 141 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 RCE1Q9Y256 329 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 MED31Q9Y3C7 131 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 ALPK2Q86TB3 2170 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 C16orf97H3BN30 126 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 J3KTA2 159 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 MRPL33O75394 65 aaKnown RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 OR7A10O76100 309 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 PLGP00747 810 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 RAP2AP10114 183 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 PF4V1P10720 104 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 FUT1P19526 365 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ATP6V1B2P21281 511 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 PAX7P23759 505 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 UQCRC1P31930 480 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 UGT2B10P36537 528 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 OMPP47874 163 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 SLC9A3P48764 834 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ZNF133P52736 654 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 UGT2B15P54855 530 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 PUDPQ08623 228 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ITGADQ13349 1161 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 TAF11Q15544 211 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 HIST3H3Q16695 136 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ZNF770Q6IQ21 691 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 HMBOX1Q6NT76 420 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 C1orf94Q6P1W5 598 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 MBOAT2Q6ZWT7 520 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 STK32CQ86UX6 486 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 P2RY8Q86VZ1 359 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 CYP4Z1Q86W10 505 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 CXorf67Q86X51 503 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 ZDHHC21Q8IVQ6 265 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ADGRG5Q8IZF4 528 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 TMEM123Q8N131 208 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 LINC00471Q8N535 108 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 CNEP1R1Q8N9A8 125 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 POMGNT2Q8NAT1 580 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 OR6X1Q8NH79 312 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 FOXRED1Q96CU9 486 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 BPIFA2Q96DR5 249 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 CLPTM1LQ96KA5 538 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ZNF385AQ96PM9 386 aaKnown RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 MRPL13Q9BYD1 178 aaKnown RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 PLA2G12AQ9BZM1 189 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 OPN3Q9H1Y3 402 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 NANSQ9NR45 359 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 GALNT8Q9NY28 637 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 NOSIPQ9Y314 301 aaKnown RBP5.92□□□□□ -1.46
VPS52-219ENST00000493379 NOX1Q9Y5S8 564 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 HCFC1P51610 2035 aa5.92□□□□□ -1.46
VPS52-219ENST00000493379 SH3PXD2BA1X283 911 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 LRRN3E7EW58 273 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 MGRN1O60291 552 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 PDE5AO76074 875 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 CH25HO95992 272 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 HPRP00739 348 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 IGHMP01871 453 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 FABP3P05413 133 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 H1F0P07305 194 aaKnown RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 HLA-DOBP13765 273 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 FAHP16930 419 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 ZNF43P17038 809 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 MAKP20794 623 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 IGHV1-2P23083 117 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 CCKARP32238 428 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 YAP1P46937 504 aaKnown RBP5.91□□□□□ -1.46
VPS52-219ENST00000493379 GSSP48637 474 aa5.91□□□□□ -1.46
VPS52-219ENST00000493379 ERVFRD-1P60508 538 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms