RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 HRASLS5Q96KN8 279 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ADAD1Q96M93 576 aaKnown RBP11.88□□□□□ -0.51
MSH6-208ENST00000493177 PITX2Q99697 317 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 APOL4Q9BPW4 351 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ING1Q9UK53 422 aaPredicted RBP11.88□□□□□ -0.51
MSH6-208ENST00000493177 NDRG4Q9ULP0 352 aaKnown RBP11.88□□□□□ -0.51
MSH6-208ENST00000493177 EMC9Q9Y3B6 208 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 TUBAL3A6NHL2 446 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 NPIPB13A6NJU9 1138 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 NPIPB4C9JG80 1138 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 H0YAE9 185 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 H7C1C5 153 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 SURF4O15260 269 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 SS18L1O75177 396 aaPredicted RBP11.87□□□□□ -0.51
MSH6-208ENST00000493177 SLC43A1O75387 559 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 TRMUO75648 421 aaKnown RBP11.87□□□□□ -0.51
MSH6-208ENST00000493177 SLC2A10O95528 541 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 TXNDC12O95881 172 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 RENP00797 406 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 IGHG1P01857 330 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ACADSP16219 412 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 AGTR1P30556 359 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 PCYT1AP49585 367 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 SELENOPP49908 381 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 KRTAP10-9P60411 292 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 LCN6P62502 163 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 IL5RAQ01344 420 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 CD47Q08722 323 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 MESTQ5EB52 335 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ARMC4Q5T2S8 1044 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 PTCHD4Q6ZW05 846 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.87□□□□□ -0.51
MSH6-208ENST00000493177 NUFIP2Q7Z417 695 aaKnown RBP11.87□□□□□ -0.51
MSH6-208ENST00000493177 CDH24Q86UP0 819 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 LURAP1LQ8IV03 231 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ZNF100Q8IYN0 542 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 TCEANCQ8N8B7 351 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ZIC4Q8N9L1 334 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 SYT14Q8NB59 555 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 SETD9Q8NE22 299 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 OR6N1Q8NGY5 312 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 OR6X1Q8NH79 312 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ZNF519Q8TB69 540 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 TFAP2CQ92754 450 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 ZNF566Q969W8 418 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 TMEM45BQ96B21 275 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 IL4I1Q96RQ9 567 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 Q9H521 79 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 CMC2Q9NRP2 79 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 PARPBPQ9NWS1 579 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 CRIM1Q9NZV1 1036 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 RAB26Q9ULW5 256 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 RCE1Q9Y256 329 aa11.87□□□□□ -0.51
MSH6-208ENST00000493177 TLX2O43763 284 aaPredicted RBP11.86□□□□□ -0.51
MSH6-208ENST00000493177 PRKYO43930 277 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 KRT33AO76009 404 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
MSH6-208ENST00000493177 CDKN2AP42771 156 aaKnown RBP11.86□□□□□ -0.51
MSH6-208ENST00000493177 CSNK1A1P48729 337 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 RUNX1T1Q06455 604 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 CRMP1Q14194 572 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 ZNF691Q5VV52 312 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 NHLRC1Q6VVB1 395 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 ADCK1Q86TW2 530 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 C8orf59Q8N0T1 100 aaPredicted RBP11.86□□□□□ -0.51
MSH6-208ENST00000493177 CYB561A3Q8NBI2 242 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 SLC37A3Q8NCC5 494 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 NOXO1Q8NFA2 376 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 HDAC2Q92769 488 aaKnown RBP11.86□□□□□ -0.51
MSH6-208ENST00000493177 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 SLC25A44Q96H78 314 aaPredicted RBP11.86□□□□□ -0.51
MSH6-208ENST00000493177 MUS81Q96NY9 551 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 OR2M2Q96R28 347 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 NMNAT3Q96T66 252 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 RERGLQ9H628 205 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 RASSF1Q9NS23 344 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 GPR52Q9Y2T5 361 aa11.86□□□□□ -0.51
MSH6-208ENST00000493177 PRSS37A4D1T9 235 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 PRR23D1E9PI22 279 aaPredicted RBP11.85□□□□□ -0.51
MSH6-208ENST00000493177 E9PQ18 207 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 M0R3G1 203 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 CRHP06850 196 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 PRR23D2P0DMB1 279 aaPredicted RBP11.85□□□□□ -0.51
MSH6-208ENST00000493177 ITGADQ13349 1161 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 IL18R1Q13478 541 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 UBE2J2Q8N2K1 259 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 GPR137CQ8N3F9 429 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 OR6K3Q8NGY3 331 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 TMEM163Q8TC26 289 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 CNBD2Q96M20 576 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 RBP7Q96R05 134 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms